Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21]
31,960 sequences; 519,005,690 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq749 152 1e-31
seq609 122 2e-22
seq1128 105 2e-17
>seq749
Length=113903
Score = 152 bits (168), Expect = 1e-31
Identities = 156/204 (76%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
||||||||| || || ||||||||||| ||||| | | ||| | ||| ||||||| ||
Sbjct 507 GTGAAGAGTAGATTCCTTTTGGATGTTGTAATCGGACAAGGTACGTCCGTCTTCCAATTG 566
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
||| || |||||||| | |||||||| || ||||||| || ||||||||||| || ||
Sbjct 567 CTTACCGGCGAAGATTAAACGTTGTTGATCTGGAGGAATACCCTCCTTGTCCTGAATTTT 626
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
| ||| |||||||| || || || || ||||||||| ||||| || || || |||||
Sbjct 627 TGCTTTAACGTTTTCAATTGTATCGGAAGGTTCAACCTCCAGAGTAATTGTTTTACCCGT 686
Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114
| ||| || || || | |||||
Sbjct 687 CAAAGTTTTAACGAAGATTTGCAT 710
Score = 136 bits (150), Expect = 9e-27
Identities = 153/205 (75%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
||||||||| ||||||||||||||||| ||||| | | ||| | ||| || |||| ||
Sbjct 51 GTGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGACAAGGTACGTCCGTCCTCCAATTG 110
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
||||| |||||||| | ||||| || || || |||| |||||||| || ||||||||
Sbjct 111 TTTGCCGGCGAAGATCAAACGTTGCTGATCTGGGGGAATGCCTTCCTTATCTTGGATCTT 170
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
|| ||||| || ||||| || || |||||| || | || || || || || ||
Sbjct 171 AGCCTTAACGTTCTCAATGGTATCTGAAGGTTCAACNTCCAAGGTAATGGTTTTGCCAGT 230
Query 211091 GAGAGTCTTTACAAACACCTGCATT 211115
||| ||||| || || | ||||||
Sbjct 231 GAGGGTCTTCACGAAGATTTGCATT 255
>seq609
Length=128410
Score = 122 bits (134), Expect = 2e-22
Identities = 162/225 (72%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | || || | || || || ||||| ||||||||||| || || | | |||
Sbjct 92965 ACGAAGACGCAGAACCAAATGGAGGGTTGACTCCTTTTGGATGTTGTAGTCGGACAAGGT 92906
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| |||||||||| || || || |||||||| | || ||||| || || || | ||
Sbjct 92905 ACGACCATCTTCCAATTGTTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGGATACC 92846
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
|| ||||| ||||| || ||| || ||||||||||||||||| || ||||| |
Sbjct 92845 CTCTTTGTCTTGGATTTTAGCTTTGACATTTTCGATGGTGTCAGAAGGCTCGACCTCTAA 92786
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
||||| ||||| || || | || || || || | |||||||||
Sbjct 92785 GGTGATGGTCTTACCAGTTAAGGTTTTGACGAAAATCTGCATTTT 92741
>seq1128
Length=88325
Score = 105 bits (116), Expect = 2e-17
Identities = 156/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
||||| | ||| || | || || || || || || || || || || || | | ||
Sbjct 331 CGAAGACGTAGCACCAAATGGAGTGTCGATTCCTTCTGTATATTGTAGTCGGACAAAGTA 272
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| |||||| || || |||||||| |||||||| | |||||||| || || || | |||
Sbjct 271 CGTCCATCCTCAAGTTGCTTGCCGGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCC 212
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
||||| || ||||| || ||| || || || ||||| || || ||||| || |
Sbjct 211 TCCTTATCTTGGATTTTGGCTTTGACATTCTCAATGGTATCCGAAGGCTCAACTTCCAAG 152
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || || || ||||||||||| || || | |||||
Sbjct 151 GTGATTGTTTTGCCGGTGAGAGTCTTCACGAAGATTTGCAT 111
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1158677341745400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |