Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21]
31,960 sequences; 519,005,690 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq749 167 2e-36
seq2732 152 3e-32
seq609 132 3e-26
seq1128 116 3e-21
seq31582 82.4 5e-11
>seq749
Length=113903
Score = 167 bits (184), Expect = 2e-36
Identities = 167/214 (78%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|||||||| || ||||| || ||| | || || || || |||||||| || ||||| |
Sbjct 1169 AAAATGCAAATCTTCGTGAAGACCTTGACTGGCAAGACCATCACTCTGGAGGTTGAACCA 1110
Query 23668 ACGGACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
| || ||| |||||| | ||||| | || | || ||||||||||| | || |||||
Sbjct 1109 TCCGATACTATTGAAAATGTTAAAGCTAAGA-TTCAAGACAAAGAAGGAATCCCCCCAGA 1051
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
|||||| |||||||| |||||||| |||||||||||||||| ||||||| | ||||||
Sbjct 1050 TCAACAACGTTTAATCTTTGCCGGTAAACAACTGGAAGACGGACGCACTCTGTCCGATTA 991
Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTT 23820
|||||| || || ||||| ||| | ||||| |||
Sbjct 990 CAACATCCAGAAGGAGTCTACACTTCATTTGGTT 957
Score = 140 bits (154), Expect = 2e-28
Identities = 149/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || ||||||||||| | ||||| ||||| || ||||| || ||||| | |
Sbjct 710 ATGCAAATCTTCGTTAAAACTTTGACGGGTAAAACAATTACTCTGGAGGTTGAACCTTCC 651
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|| || |||||| | ||| ||||||| ||||| || ||| | || |||||||||
Sbjct 650 GATACAATTGAAAACGTTAAAGCAAAAATTCAGGACAAGGAGGGTATTCCTCCAGATCAA 591
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|| |||||||| || ||||| || ||| ||||||||| ||| || || ||||||||||
Sbjct 590 CAACGTTTAATCTTCGCCGGTAAGCAATTGGAAGACGGACGTACCTTGTCCGATTACAAC 531
Query 23791 ATACAAAAAGAGTCCAC 23807
|| ||||| || || ||
Sbjct 530 ATCCAAAAGGAATCTAC 514
Score = 134 bits (148), Expect = 9e-27
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| ||||| | ||||||||||| |||||| | || ||||| | |
Sbjct 938 ATGCAGATTTTCGTCAAAACTTTGACGGGAAAAACCATCACTTTGGAGGTTGAGCCTTCC 879
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| || |||| ||| | ||| | |||| || || || ||||| | || ||||||||
Sbjct 878 GATACCATTGAGAATGTCAAAGCTAAAA-TTCAAGATAAGGAAGGAATCCCCCCAGATCA 820
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| ||||| || || || |||||||| |||| || | |||||| | ||| || ||
Sbjct 819 ACAACGTTTGATTTTCGCTGGCAAACAGTTGGAGGATGGACGCACACTGTCCGACTATAA 760
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
|| ||||| || ||||| ||||||||||| || | || || || ||
Sbjct 759 TATTCAAAAGGAATCCACTCTACATTTAGTTCTACGCTTACGTGGTGG 712
Score = 114 bits (126), Expect = 9e-21
Identities = 146/199 (73%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
|||||| || ||||| || |||||||| || ||||| || || | || ||||| | |
Sbjct 255 AATGCAAATCTTCGTGAAGACCCTCACTGGCAAAACCATTACCTTGGANGTTGAACCTTC 196
Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728
|| || |||| || |||| | || | | || || ||||| | || |||||||
Sbjct 195 AGATACCATTGAGAACGTTAAGGCTAAGA-TCCAAGATAAGGAAGGCATTCCCCCAGATC 137
Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788
| || ||||| || || |||||||||||| |||| |||| ||| || || ||||||||
Sbjct 136 AGCAACGTTTGATCTTCGCCGGCAAACAATTGGAGGACGGACGTACCTTGTCCGATTACA 77
Query 23789 ACATACAAAAAGAGTCCAC 23807
|||| ||||||||||| ||
Sbjct 76 ACATCCAAAAAGAGTCTAC 58
Score = 113 bits (124), Expect = 3e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || ||||| || |||||||| || ||||| |||||| | |||||||| | |
Sbjct 482 ATGCAAATCTTCGTAAAGACCCTCACCGGCAAAACCATCACTTTGGAAGTTGAGCCTTCA 423
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|| || |||| | |||| || || || || || ||| | || |||||||||
Sbjct 422 GATACCATTGAGAACGTAAAGGCCAAGATCCAAGATAAGGAGGGTATTCCTCCAGATCAA 363
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|| ||||| || || ||||| || ||| |||| |||| |||||| || ||| ||||||
Sbjct 362 CAACGTTTGATCTTCGCCGGTAAGCAATTGGAGGACGGACGCACATTGTCCGACTACAAC 303
Query 23791 ATACAAAAAGAGTCCAC 23807
|| || || ||||| ||
Sbjct 302 ATCCAGAAGGAGTCTAC 286
>seq2732
Length=47336
Score = 152 bits (168), Expect = 3e-32
Identities = 162/211 (77%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
|||||| || ||||| |||||||| ||||| || || |||||||| || ||||| | |
Sbjct 1833 AATGCAAATATTCGTAAAAACCCTTACGGGTAAGACCATCACTCTTGAGGTTGAGCCTTC 1774
Query 23670 GGACACTGTTGAA-ATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728
||| ||| ||||| || |||| | |||| || || || ||||| | ||||| ||||
Sbjct 1773 GGATACTATTGAACATGTTAAGGCCAAAA-TTCAAGATAAGGAAGGAATTCCGCCTGATC 1715
Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788
|||||||| |||| |||||||| || ||| ||||||| | ||||| || | || || |
Sbjct 1714 AACAGCGTCTAATTTTTGCCGGAAAGCAATTGGAAGATGGTCGCACATTGGCTGACTATA 1655
Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGT 23819
| || || |||||||| ||||| ||||||||
Sbjct 1654 ATATTCAGAAAGAGTCTACATTGCATTTAGT 1624
>seq609
Length=128410
Score = 132 bits (146), Expect = 3e-26
Identities = 157/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
||||||||||||||||| |||||| | || || || || ||||| | || || || |
Sbjct 92741 AAAATGCAGATTTTCGTCAAAACCTTAACTGGTAAGACCATCACCTTAGAGGTCGAGCCT 92800
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
| ||||| | |||| | ||| ||||| |||||||| ||| | || ||||||
Sbjct 92801 TCTGACACCATCGAAAATGTCAAAGCTAAAATCCAAGACAAAGAGGGTATCCCCCCAGAT 92860
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
||||||||||| || || ||||| |||||| ||||||| | || || || ||| |||
Sbjct 92861 CAACAGCGTTTGATCTTCGCCGGAAAACAATTGGAAGATGGTCGTACCTTGTCCGACTAC 92920
Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTT 23820
||||| ||||| ||||| || | ||||| |||
Sbjct 92921 AACATCCAAAAGGAGTCAACCCTCCATTTGGTT 92953
>seq1128
Length=88325
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || ||||| || || ||||| || ||||| ||||| | |||||||| | ||
Sbjct 111 ATGCAAATCTTCGTGAAGACTCTCACCGGCAAAACAATCACCTTGGAAGTTGAGCCTTCG 170
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| || |||| ||| | ||| | |||| | || || || || | || ||||||||
Sbjct 171 GATACCATTGAGAATGTCAAAGCCAAAA-TCCAAGATAAGGAGGGAATCCCACCAGATCA 229
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| ||||| || || |||||||| ||||| || || | ||| ||||| ||| |||||
Sbjct 230 ACAACGTTTGATCTTCGCCGGCAAGCAACTTGAGGATGGACGTACTTTGTCCGACTACAA 289
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
||||| || || || ||| | ||||| || || | | || |||||
Sbjct 290 TATACAGAAGGAATCGACACTCCATTTGGTGCTACGTCTTCGCGGAGG 337
>seq31582
Length=1007
Score = 82.4 bits (90), Expect = 5e-11
Identities = 68/83 (82%), Gaps = 0/83 (0%)
Strand=Plus/Minus
Query 23722 CCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGC 23781
||||||||||| |||||||| || ||||| || ||| ||||||||| ||| || || |
Sbjct 673 CCAGATCAACAACGTTTAATCTTCGCCGGTAAGCAATTGGAAGACGGACGTACCTTGTTC 614
Query 23782 GATTACAACATACAAAAAGAGTC 23804
||||||||||| ||||| || ||
Sbjct 613 GATTACAACATCCAAAAGGAATC 591
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337877941035680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |