Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq749 167 2e-36 seq2732 152 3e-32 seq609 132 3e-26 seq1128 116 3e-21 seq31582 82.4 5e-11 >seq749 Length=113903 Score = 167 bits (184), Expect = 2e-36 Identities = 167/214 (78%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 |||||||| || ||||| || ||| | || || || || |||||||| || ||||| | Sbjct 1169 AAAATGCAAATCTTCGTGAAGACCTTGACTGGCAAGACCATCACTCTGGAGGTTGAACCA 1110 Query 23668 ACGGACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | || ||| |||||| | ||||| | || | || ||||||||||| | || ||||| Sbjct 1109 TCCGATACTATTGAAAATGTTAAAGCTAAGA-TTCAAGACAAAGAAGGAATCCCCCCAGA 1051 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 |||||| |||||||| |||||||| |||||||||||||||| ||||||| | |||||| Sbjct 1050 TCAACAACGTTTAATCTTTGCCGGTAAACAACTGGAAGACGGACGCACTCTGTCCGATTA 991 Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTT 23820 |||||| || || ||||| ||| | ||||| ||| Sbjct 990 CAACATCCAGAAGGAGTCTACACTTCATTTGGTT 957 Score = 140 bits (154), Expect = 2e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||||||||| | ||||| ||||| || ||||| || ||||| | | Sbjct 710 ATGCAAATCTTCGTTAAAACTTTGACGGGTAAAACAATTACTCTGGAGGTTGAACCTTCC 651 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || |||||| | ||| ||||||| ||||| || ||| | || ||||||||| Sbjct 650 GATACAATTGAAAACGTTAAAGCAAAAATTCAGGACAAGGAGGGTATTCCTCCAGATCAA 591 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || |||||||| || ||||| || ||| ||||||||| ||| || || |||||||||| Sbjct 590 CAACGTTTAATCTTCGCCGGTAAGCAATTGGAAGACGGACGTACCTTGTCCGATTACAAC 531 Query 23791 ATACAAAAAGAGTCCAC 23807 || ||||| || || || Sbjct 530 ATCCAAAAGGAATCTAC 514 Score = 134 bits (148), Expect = 9e-27 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| ||||| | ||||||||||| |||||| | || ||||| | | Sbjct 938 ATGCAGATTTTCGTCAAAACTTTGACGGGAAAAACCATCACTTTGGAGGTTGAGCCTTCC 879 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || |||| ||| | ||| | |||| || || || ||||| | || |||||||| Sbjct 878 GATACCATTGAGAATGTCAAAGCTAAAA-TTCAAGATAAGGAAGGAATCCCCCCAGATCA 820 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| ||||| || || || |||||||| |||| || | |||||| | ||| || || Sbjct 819 ACAACGTTTGATTTTCGCTGGCAAACAGTTGGAGGATGGACGCACACTGTCCGACTATAA 760 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || ||||| || ||||| ||||||||||| || | || || || || Sbjct 759 TATTCAAAAGGAATCCACTCTACATTTAGTTCTACGCTTACGTGGTGG 712 Score = 114 bits (126), Expect = 9e-21 Identities = 146/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| || ||||| || |||||||| || ||||| || || | || ||||| | | Sbjct 255 AATGCAAATCTTCGTGAAGACCCTCACTGGCAAAACCATTACCTTGGANGTTGAACCTTC 196 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 || || |||| || |||| | || | | || || ||||| | || ||||||| Sbjct 195 AGATACCATTGAGAACGTTAAGGCTAAGA-TCCAAGATAAGGAAGGCATTCCCCCAGATC 137 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 | || ||||| || || |||||||||||| |||| |||| ||| || || |||||||| Sbjct 136 AGCAACGTTTGATCTTCGCCGGCAAACAATTGGAGGACGGACGTACCTTGTCCGATTACA 77 Query 23789 ACATACAAAAAGAGTCCAC 23807 |||| ||||||||||| || Sbjct 76 ACATCCAAAAAGAGTCTAC 58 Score = 113 bits (124), Expect = 3e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| || |||||||| || ||||| |||||| | |||||||| | | Sbjct 482 ATGCAAATCTTCGTAAAGACCCTCACCGGCAAAACCATCACTTTGGAAGTTGAGCCTTCA 423 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || |||| | |||| || || || || || ||| | || ||||||||| Sbjct 422 GATACCATTGAGAACGTAAAGGCCAAGATCCAAGATAAGGAGGGTATTCCTCCAGATCAA 363 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||||| || || ||||| || ||| |||| |||| |||||| || ||| |||||| Sbjct 362 CAACGTTTGATCTTCGCCGGTAAGCAATTGGAGGACGGACGCACATTGTCCGACTACAAC 303 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 302 ATCCAGAAGGAGTCTAC 286 >seq2732 Length=47336 Score = 152 bits (168), Expect = 3e-32 Identities = 162/211 (77%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| || ||||| |||||||| ||||| || || |||||||| || ||||| | | Sbjct 1833 AATGCAAATATTCGTAAAAACCCTTACGGGTAAGACCATCACTCTTGAGGTTGAGCCTTC 1774 Query 23670 GGACACTGTTGAA-ATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 ||| ||| ||||| || |||| | |||| || || || ||||| | ||||| |||| Sbjct 1773 GGATACTATTGAACATGTTAAGGCCAAAA-TTCAAGATAAGGAAGGAATTCCGCCTGATC 1715 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 |||||||| |||| |||||||| || ||| ||||||| | ||||| || | || || | Sbjct 1714 AACAGCGTCTAATTTTTGCCGGAAAGCAATTGGAAGATGGTCGCACATTGGCTGACTATA 1655 Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGT 23819 | || || |||||||| ||||| |||||||| Sbjct 1654 ATATTCAGAAAGAGTCTACATTGCATTTAGT 1624 >seq609 Length=128410 Score = 132 bits (146), Expect = 3e-26 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||||||||| |||||| | || || || || ||||| | || || || | Sbjct 92741 AAAATGCAGATTTTCGTCAAAACCTTAACTGGTAAGACCATCACCTTAGAGGTCGAGCCT 92800 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | ||||| | |||| | ||| ||||| |||||||| ||| | || |||||| Sbjct 92801 TCTGACACCATCGAAAATGTCAAAGCTAAAATCCAAGACAAAGAGGGTATCCCCCCAGAT 92860 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 ||||||||||| || || ||||| |||||| ||||||| | || || || ||| ||| Sbjct 92861 CAACAGCGTTTGATCTTCGCCGGAAAACAATTGGAAGATGGTCGTACCTTGTCCGACTAC 92920 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTT 23820 ||||| ||||| ||||| || | ||||| ||| Sbjct 92921 AACATCCAAAAGGAGTCAACCCTCCATTTGGTT 92953 >seq1128 Length=88325 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| || || ||||| || ||||| ||||| | |||||||| | || Sbjct 111 ATGCAAATCTTCGTGAAGACTCTCACCGGCAAAACAATCACCTTGGAAGTTGAGCCTTCG 170 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || |||| ||| | ||| | |||| | || || || || | || |||||||| Sbjct 171 GATACCATTGAGAATGTCAAAGCCAAAA-TCCAAGATAAGGAGGGAATCCCACCAGATCA 229 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| ||||| || || |||||||| ||||| || || | ||| ||||| ||| ||||| Sbjct 230 ACAACGTTTGATCTTCGCCGGCAAGCAACTTGAGGATGGACGTACTTTGTCCGACTACAA 289 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||||| || || || ||| | ||||| || || | | || ||||| Sbjct 290 TATACAGAAGGAATCGACACTCCATTTGGTGCTACGTCTTCGCGGAGG 337 >seq31582 Length=1007 Score = 82.4 bits (90), Expect = 5e-11 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 23722 CCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGC 23781 ||||||||||| |||||||| || ||||| || ||| ||||||||| ||| || || | Sbjct 673 CCAGATCAACAACGTTTAATCTTCGCCGGTAAGCAATTGGAAGACGGACGTACCTTGTTC 614 Query 23782 GATTACAACATACAAAAAGAGTC 23804 ||||||||||| ||||| || || Sbjct 613 GATTACAACATCCAAAAGGAATC 591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337877941035680