Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21]
31,960 sequences; 519,005,690 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq609 143 6e-29
seq749 138 3e-27
seq8751 122 2e-22
seq1492 107 5e-18
seq1175 96.9 8e-15
seq2484 84.2 5e-11
>seq609
Length=128410
Score = 143 bits (158), Expect = 6e-29
Identities = 169/226 (75%), Gaps = 2/226 (1%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | ||| || | ||||| || || || ||||||| ||||| |||| ||| ||
Sbjct 92965 ACGAAGACGCAGAACCAAATGGAGGGTTGACTCCTTTTGGATGTTGTAGTCGGACAAGGT 92906
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| |||||||| | || || || |||||||| | || ||||| || || || |||||
Sbjct 92905 ACGACCATCTTCCAATTGTTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGGATACC 92846
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTC-ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670
|| ||||||||||| ||| |||| ||| |||||||||||| || | || || ||||
Sbjct 92845 CTCTTTGTCTTGGAT-TTTAGCTTTGACATTTTCGATGGTGTCAGAAGGCTCGACCTCTA 92787
Query 225671 ACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
| ||||| ||||| || || || ||||| | ||| | ||||||||
Sbjct 92786 AGGTGATGGTCTTACCAGTTAAGGTTTTGACGAAAATCTGCATTTT 92741
>seq749
Length=113903
Score = 138 bits (152), Expect = 3e-27
Identities = 155/205 (76%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 225510 GTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTG 225569
||| ||||| ||||| ||||||| |||||||||| ||| || | || ||||| | ||
Sbjct 507 GTGAAGAGTAGATTCCTTTTGGATGTTGTAATCGGACAAGGTACGTCCGTCTTCCAATTG 566
Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629
||| || |||||||| | |||||||| || || |||||||| |||||||| || || ||
Sbjct 567 CTTACCGGCGAAGATTAAACGTTGTTGATCTGGAGGAATACCCTCCTTGTCCTGAAT-TT 625
Query 225630 TTGCTTCACAGCTT-CGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCG 225688
|||||| | | || | || || || || | ||| || || | || || || || ||||
Sbjct 626 TTGCTTTAACGTTTTCAATTGTATCGGAAGGTTCAACCTCCAGAGTAATTGTTTTACCCG 685
Query 225689 TCAAAGTTTTTATGAACACTTGCAT 225713
|||||||||| | ||| | ||||||
Sbjct 686 TCAAAGTTTTAACGAAGATTTGCAT 710
Score = 123 bits (136), Expect = 6e-23
Identities = 161/223 (72%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| || | || || | ||| ||||| || |||||||||| |||||||||| ||| ||
Sbjct 33 ACGGAGACGCAATACCAAGTGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGACAAGGT 92
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| || || || | || || || |||||||| | ||||| || || || ||||| ||
Sbjct 93 ACGTCCGTCCTCCAATTGTTTGCCGGCGAAGATCAAACGTTGCTGATCTGGGGGAATGCC 152
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||| ||||||||||| ||| || || ||||| ||||| | ||| || || ||
Sbjct 153 TTCCTTATCTTGGATCTTAGCCTTAACGTTCTCAATGGTATCTGAAGGTTCAACNTCCAA 212
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714
|| || || ||||| || | || || | ||| | |||||||
Sbjct 213 GGTAATGGTTTTGCCAGTGAGGGTCTTCACGAAGATTTGCATT 255
Score = 122 bits (134), Expect = 2e-22
Identities = 160/222 (72%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| || | || || | ||| ||||| || || || |||| ||||| |||| ||| ||
Sbjct 261 ACGGAGACGCAATACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAATGT 320
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| || || || | ||||| || |||||||| | |||||||| || || ||||||||
Sbjct 321 GCGTCCGTCCTCCAATTGCTTACCGGCGAAGATCAAACGTTGTTGATCTGGAGGAATACC 380
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||| ||||||||||| ||| || || ||||| ||||| | || || || ||
Sbjct 381 CTCCTTATCTTGGATCTTGGCCTTTACGTTCTCAATGGTATCTGAAGGCTCAACTTCCAA 440
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || ||||| || | || |||| ||| | ||||||
Sbjct 441 AGTGATGGTTTTGCCGGTGAGGGTCTTTACGAAGATTTGCAT 482
Score = 122 bits (134), Expect = 2e-22
Identities = 151/204 (74%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570
|| ||||||||||| ||||| | ||| || |||| || || | ||||| || | |||
Sbjct 736 TGTAGAGTGGATTCCTTTTGAATATTATAGTCGGACAGTGTGCGTCCATCCTCCAACTGT 795
Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630
|| |||||||| || | |||||||| || || || || |||||||| ||||| || |||
Sbjct 796 TTGCCAGCGAAAATCAAACGTTGTTGATCTGGGGGGATTCCTTCCTTATCTTGAAT-TTT 854
Query 225631 TGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
|| || ||| || ||||| || || | || || || || ||||| || || |||||
Sbjct 855 AGCTTTGACATTCTCAATGGTATCGGAAGGCTCAACCTCCAAAGTGATGGTTTTTCCCGT 914
Query 225690 CAAAGTTTTTATGAACACTTGCAT 225713
||||||||| | ||| | |||||
Sbjct 915 CAAAGTTTTGACGAAAATCTGCAT 938
>seq8751
Length=10379
Score = 122 bits (134), Expect = 2e-22
Identities = 131/172 (76%), Gaps = 1/172 (1%)
Strand=Plus/Plus
Query 7551 CCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTAT 7610
|||| |||| || || ||| | || || ||||| || || || ||||||||| | |||||
Sbjct 4658 CCAA-TTTATAATGTAATTGTAACAGCCCATGCTTTCGTAATAATTTTCTTTATAGTTAT 4716
Query 7611 GCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGA 7670
|| |||| || || ||| ||||||||||| | |||||||||| | ||||| |||||
Sbjct 4717 ACCCATTATAATTGGTGGTGTCGGAAATTGACTTCTTCCTTTAATATTAGGTGCACCTGA 4776
Query 7671 TATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCC 7722
||| || || ||| | | || | |||||| |||||||| ||| | ||||||
Sbjct 4777 TATAGCATTCCCACGAATAAATATTATAAGATTTTGATTTCTAACCCCTTCC 4828
>seq1492
Length=72469
Score = 107 bits (118), Expect = 5e-18
Identities = 112/147 (76%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 7576 GCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAGGCGGTTTCGGA 7635
|| ||||| || || || ||||||||| | ||||| || ||| || || || ||||||
Sbjct 7940 GCCCATGCTTTCGTAATAATTTTCTTTATAGTTATACCTACTATAATTGGTGGATTCGGA 7881
Query 7636 AATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAAGGCTTAACAAT 7695
|||||| | ||| ||||||| | ||||| || ||||| || || ||| | || |||
Sbjct 7880 AATTGACTTGTTTCTTTAATATTAGGTGCACCCGATATAGCGTTCCCACGAAAAAATAAT 7821
Query 7696 ATAAGTTTTTGATTACTACCGCCTTCC 7722
||||| ||||||||| |||| ||||||
Sbjct 7820 ATAAGATTTTGATTATTACCCCCTTCC 7794
Score = 102 bits (112), Expect = 2e-16
Identities = 82/99 (83%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731
||| || || ||||| ||||| ||||||||||| ||||| |||||||| || || ||||
Sbjct 7392 TTCTGGGTGCCCAAAGAATCAAAATAAATGTTGGTAAAGAATAGGATCTCCCCCTCCTGC 7451
Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770
|||||||||||| |||||| ||||||| ||| |||||
Sbjct 7452 AGGATCAAAAAAGGAAGTATTTAAATTTCGATCTGTTAA 7490
>seq1175
Length=85926
Score = 96.9 bits (106), Expect = 8e-15
Identities = 100/131 (76%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 7579 CATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAGGCGGTTTCGGAAAT 7638
|||| |||||||| ||||| ||| | |||| ||| |||| || | || |||||||||
Sbjct 78185 CATGATTTTGTTATCATTTTATTTATGGTTAAACCGATTATAATTAGTGGATTCGGAAAT 78244
Query 7639 TGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAAGGCTTAACAATATA 7698
| ||| ||||||||||| | | ||||| ||||| ||||||||| | | || |||| |
Sbjct 78245 TAATTTGTTCCTTTAATATTAGAGGCTCCCGATATAGCTTTTCCACGAATAAATAATACA 78304
Query 7699 AGTTTTTGATT 7709
|| || |||||
Sbjct 78305 AGATTCTGATT 78315
>seq2484
Length=50564
Score = 84.2 bits (92), Expect = 5e-11
Identities = 78/99 (79%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731
||| ||||| ||||| ||||| ||||||||||| || || |||||||| || || ||||
Sbjct 17706 TTCTGGATGTCCAAAGAATCAAAATAAATGTTGGTATAGAATAGGATCTCCCCCTCCTGC 17647
Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770
| || ||||| |||||| ||||||| ||| |||||
Sbjct 17646 CGAGTCGAAAAAAGAAGTATTTAAATTTCGATCTGTTAA 17608
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192042873380240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |