Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq609 143 6e-29 seq749 138 3e-27 seq8751 122 2e-22 seq1492 107 5e-18 seq1175 96.9 8e-15 seq2484 84.2 5e-11 >seq609 Length=128410 Score = 143 bits (158), Expect = 6e-29 Identities = 169/226 (75%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||| || | ||||| || || || ||||||| ||||| |||| ||| || Sbjct 92965 ACGAAGACGCAGAACCAAATGGAGGGTTGACTCCTTTTGGATGTTGTAGTCGGACAAGGT 92906 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| | || || || |||||||| | || ||||| || || || ||||| Sbjct 92905 ACGACCATCTTCCAATTGTTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGGATACC 92846 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTC-ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670 || ||||||||||| ||| |||| ||| |||||||||||| || | || || |||| Sbjct 92845 CTCTTTGTCTTGGAT-TTTAGCTTTGACATTTTCGATGGTGTCAGAAGGCTCGACCTCTA 92787 Query 225671 ACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 | ||||| ||||| || || || ||||| | ||| | |||||||| Sbjct 92786 AGGTGATGGTCTTACCAGTTAAGGTTTTGACGAAAATCTGCATTTT 92741 >seq749 Length=113903 Score = 138 bits (152), Expect = 3e-27 Identities = 155/205 (76%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 225510 GTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTG 225569 ||| ||||| ||||| ||||||| |||||||||| ||| || | || ||||| | || Sbjct 507 GTGAAGAGTAGATTCCTTTTGGATGTTGTAATCGGACAAGGTACGTCCGTCTTCCAATTG 566 Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629 ||| || |||||||| | |||||||| || || |||||||| |||||||| || || || Sbjct 567 CTTACCGGCGAAGATTAAACGTTGTTGATCTGGAGGAATACCCTCCTTGTCCTGAAT-TT 625 Query 225630 TTGCTTCACAGCTT-CGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCG 225688 |||||| | | || | || || || || | ||| || || | || || || || |||| Sbjct 626 TTGCTTTAACGTTTTCAATTGTATCGGAAGGTTCAACCTCCAGAGTAATTGTTTTACCCG 685 Query 225689 TCAAAGTTTTTATGAACACTTGCAT 225713 |||||||||| | ||| | |||||| Sbjct 686 TCAAAGTTTTAACGAAGATTTGCAT 710 Score = 123 bits (136), Expect = 6e-23 Identities = 161/223 (72%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | || || | ||| ||||| || |||||||||| |||||||||| ||| || Sbjct 33 ACGGAGACGCAATACCAAGTGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGACAAGGT 92 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || | || || || |||||||| | ||||| || || || ||||| || Sbjct 93 ACGTCCGTCCTCCAATTGTTTGCCGGCGAAGATCAAACGTTGCTGATCTGGGGGAATGCC 152 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||| ||||||||||| ||| || || ||||| ||||| | ||| || || || Sbjct 153 TTCCTTATCTTGGATCTTAGCCTTAACGTTCTCAATGGTATCTGAAGGTTCAACNTCCAA 212 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 || || || ||||| || | || || | ||| | ||||||| Sbjct 213 GGTAATGGTTTTGCCAGTGAGGGTCTTCACGAAGATTTGCATT 255 Score = 122 bits (134), Expect = 2e-22 Identities = 160/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | || || | ||| ||||| || || || |||| ||||| |||| ||| || Sbjct 261 ACGGAGACGCAATACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAATGT 320 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || | ||||| || |||||||| | |||||||| || || |||||||| Sbjct 321 GCGTCCGTCCTCCAATTGCTTACCGGCGAAGATCAAACGTTGTTGATCTGGAGGAATACC 380 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||| ||||||||||| ||| || || ||||| ||||| | || || || || Sbjct 381 CTCCTTATCTTGGATCTTGGCCTTTACGTTCTCAATGGTATCTGAAGGCTCAACTTCCAA 440 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || ||||| || | || |||| ||| | |||||| Sbjct 441 AGTGATGGTTTTGCCGGTGAGGGTCTTTACGAAGATTTGCAT 482 Score = 122 bits (134), Expect = 2e-22 Identities = 151/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570 || ||||||||||| ||||| | ||| || |||| || || | ||||| || | ||| Sbjct 736 TGTAGAGTGGATTCCTTTTGAATATTATAGTCGGACAGTGTGCGTCCATCCTCCAACTGT 795 Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || |||||||| || | |||||||| || || || || |||||||| ||||| || ||| Sbjct 796 TTGCCAGCGAAAATCAAACGTTGTTGATCTGGGGGGATTCCTTCCTTATCTTGAAT-TTT 854 Query 225631 TGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 || || ||| || ||||| || || | || || || || ||||| || || ||||| Sbjct 855 AGCTTTGACATTCTCAATGGTATCGGAAGGCTCAACCTCCAAAGTGATGGTTTTTCCCGT 914 Query 225690 CAAAGTTTTTATGAACACTTGCAT 225713 ||||||||| | ||| | ||||| Sbjct 915 CAAAGTTTTGACGAAAATCTGCAT 938 >seq8751 Length=10379 Score = 122 bits (134), Expect = 2e-22 Identities = 131/172 (76%), Gaps = 1/172 (1%) Strand=Plus/Plus Query 7551 CCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTAT 7610 |||| |||| || || ||| | || || ||||| || || || ||||||||| | ||||| Sbjct 4658 CCAA-TTTATAATGTAATTGTAACAGCCCATGCTTTCGTAATAATTTTCTTTATAGTTAT 4716 Query 7611 GCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGA 7670 || |||| || || ||| ||||||||||| | |||||||||| | ||||| ||||| Sbjct 4717 ACCCATTATAATTGGTGGTGTCGGAAATTGACTTCTTCCTTTAATATTAGGTGCACCTGA 4776 Query 7671 TATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCC 7722 ||| || || ||| | | || | |||||| |||||||| ||| | |||||| Sbjct 4777 TATAGCATTCCCACGAATAAATATTATAAGATTTTGATTTCTAACCCCTTCC 4828 >seq1492 Length=72469 Score = 107 bits (118), Expect = 5e-18 Identities = 112/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 7576 GCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAGGCGGTTTCGGA 7635 || ||||| || || || ||||||||| | ||||| || ||| || || || |||||| Sbjct 7940 GCCCATGCTTTCGTAATAATTTTCTTTATAGTTATACCTACTATAATTGGTGGATTCGGA 7881 Query 7636 AATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAAGGCTTAACAAT 7695 |||||| | ||| ||||||| | ||||| || ||||| || || ||| | || ||| Sbjct 7880 AATTGACTTGTTTCTTTAATATTAGGTGCACCCGATATAGCGTTCCCACGAAAAAATAAT 7821 Query 7696 ATAAGTTTTTGATTACTACCGCCTTCC 7722 ||||| ||||||||| |||| |||||| Sbjct 7820 ATAAGATTTTGATTATTACCCCCTTCC 7794 Score = 102 bits (112), Expect = 2e-16 Identities = 82/99 (83%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 ||| || || ||||| ||||| ||||||||||| ||||| |||||||| || || |||| Sbjct 7392 TTCTGGGTGCCCAAAGAATCAAAATAAATGTTGGTAAAGAATAGGATCTCCCCCTCCTGC 7451 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770 |||||||||||| |||||| ||||||| ||| ||||| Sbjct 7452 AGGATCAAAAAAGGAAGTATTTAAATTTCGATCTGTTAA 7490 >seq1175 Length=85926 Score = 96.9 bits (106), Expect = 8e-15 Identities = 100/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 7579 CATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAGGCGGTTTCGGAAAT 7638 |||| |||||||| ||||| ||| | |||| ||| |||| || | || ||||||||| Sbjct 78185 CATGATTTTGTTATCATTTTATTTATGGTTAAACCGATTATAATTAGTGGATTCGGAAAT 78244 Query 7639 TGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAAGGCTTAACAATATA 7698 | ||| ||||||||||| | | ||||| ||||| ||||||||| | | || |||| | Sbjct 78245 TAATTTGTTCCTTTAATATTAGAGGCTCCCGATATAGCTTTTCCACGAATAAATAATACA 78304 Query 7699 AGTTTTTGATT 7709 || || ||||| Sbjct 78305 AGATTCTGATT 78315 >seq2484 Length=50564 Score = 84.2 bits (92), Expect = 5e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 ||| ||||| ||||| ||||| ||||||||||| || || |||||||| || || |||| Sbjct 17706 TTCTGGATGTCCAAAGAATCAAAATAAATGTTGGTATAGAATAGGATCTCCCCCTCCTGC 17647 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770 | || ||||| |||||| ||||||| ||| ||||| Sbjct 17646 CGAGTCGAAAAAAGAAGTATTTAAATTTCGATCTGTTAA 17608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192042873380240