Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq225 253 2e-62 >seq225 Length=233467 Score = 253 bits (280), Expect = 2e-62 Identities = 502/738 (68%), Gaps = 19/738 (3%) Strand=Plus/Minus Query 4353 TTTTCACACTT-TAGAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCAT 4411 ||||| |||| ||| | |||||||| || ||||| |||||||| ||||| | | ||| Sbjct 26909 TTTTCCCACTCCTAGCTCGACAAGCAAACGATCAGCCACAAATTCGATATAATCGGACAT 26850 Query 4412 GAGTTCGCAGTTAATTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTC 4471 |||| ||| || || || ||||| |||| || | |||| || || || || || || Sbjct 26849 TAGTTTGCAATTCATACCGATTAAATTCACCGGCAAAGCGTCAGTTAAGAATTCCTGCTC 26790 Query 4472 TATAGTTACGGCTTCTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAA 4531 || | || ||||| | ||||| || ||| || ||| |||||| | || ||| Sbjct 26789 AATTTTAACAGCTTCAGAAATTATTTCAACAATTCGCTCATTACTTGGTTTTTGTATTAA 26730 Query 4532 GTATCCAAACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTC 4591 | | |||| ||||| || || |||||||| | || || |||| ||| ||||| Sbjct 26729 ATGTTGGAACATCAAACATGCGAAGTCACAATGAAGTCCCTCATCTCGTGAAATTAGTTC 26670 Query 4592 GTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAA 4651 || ||||| || || || ||||||||||| | || |||||||| || || | ||||| Sbjct 26669 ATTGGAAAATGTCAAGCCTGGCATTAAACCACGTTTCTTAAGCCAGAAGATCGAAGCAAA 26610 Query 4652 TGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGA 4711 ||| ||||| || ||||| ||||| ||||| || | || || || | | Sbjct 26609 ACTGCCACTGAAGAAAATACCTTCAACGGCAGCAAATGCAATTACACGTTCACCAA---A 26553 Query 4712 GCTGGCTTTGTCTT-----TAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCAC 4766 | |||| | ||| |||||| | ||||| | || || ||| ||| Sbjct 26552 GTTGGC--CGACTTCGAGGAAATCCAAGCAAGCGCCCAATCTGCCTTACGCTTTACGGCA 26495 Query 4767 GGAATTGTGTATATAGCGTTAAATA---ATTTACTTT-TTTCAAATGGGTCTTGAATATA 4822 || ||||| | |||||| || |||| | || |||| |||| | ||| | |||||| Sbjct 26494 GGCATTGTCTCTATAGCATTGAATAAGTAATTCCTTTGTTTC----GAGTCCTTAATATA 26439 Query 4823 AGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCC 4882 || || |||| || |||||||||||||||||| | ||| || || ||||| |||||||| Sbjct 26438 TGTATCAATTAATATGCTATACATTTCAGAATGCACATTCTCCATCGCAATTTGAAATCC 26379 Query 4883 GTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTC 4942 || ||||| | || ||||| ||||| ||||| | || || | ||| |||| ||||| Sbjct 26378 ATAGAAGCAACGTGCCTCTGTCACTTGGACTTCCTGGCAGAAGCGTTCAACTACATTTTC 26319 Query 4943 GTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTC 5002 || || ||||| ||| || || ||||| || || || || || ||||| | |||| Sbjct 26318 ATTCACAATACCATCAGATGCGGCGAAAAAGGCTAACACGTGTGAAATAAAATGTCGTTC 26259 Query 5003 GTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGT 5062 | | | || | ||| | || |||||||| | ||| ||||| | || || Sbjct 26258 ATTATCAGTTAGACGTGCCCAATCATCCATATCTTTAGAAAGATCTACTTCCCCTACTGT 26199 Query 5063 CCAAAACGACGCTTCCGC 5080 ||| ||||| ||||| || Sbjct 26198 CCAGAACGATGCTTCTGC 26181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426883258842680