Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21]
31,960 sequences; 519,005,690 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq225 253 2e-62
>seq225
Length=233467
Score = 253 bits (280), Expect = 2e-62
Identities = 502/738 (68%), Gaps = 19/738 (3%)
Strand=Plus/Minus
Query 4353 TTTTCACACTT-TAGAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCAT 4411
||||| |||| ||| | |||||||| || ||||| |||||||| ||||| | | |||
Sbjct 26909 TTTTCCCACTCCTAGCTCGACAAGCAAACGATCAGCCACAAATTCGATATAATCGGACAT 26850
Query 4412 GAGTTCGCAGTTAATTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTC 4471
|||| ||| || || || ||||| |||| || | |||| || || || || || ||
Sbjct 26849 TAGTTTGCAATTCATACCGATTAAATTCACCGGCAAAGCGTCAGTTAAGAATTCCTGCTC 26790
Query 4472 TATAGTTACGGCTTCTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAA 4531
|| | || ||||| | ||||| || ||| || ||| |||||| | || |||
Sbjct 26789 AATTTTAACAGCTTCAGAAATTATTTCAACAATTCGCTCATTACTTGGTTTTTGTATTAA 26730
Query 4532 GTATCCAAACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTC 4591
| | |||| ||||| || || |||||||| | || || |||| ||| |||||
Sbjct 26729 ATGTTGGAACATCAAACATGCGAAGTCACAATGAAGTCCCTCATCTCGTGAAATTAGTTC 26670
Query 4592 GTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAA 4651
|| ||||| || || || ||||||||||| | || |||||||| || || | |||||
Sbjct 26669 ATTGGAAAATGTCAAGCCTGGCATTAAACCACGTTTCTTAAGCCAGAAGATCGAAGCAAA 26610
Query 4652 TGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGA 4711
||| ||||| || ||||| ||||| ||||| || | || || || | |
Sbjct 26609 ACTGCCACTGAAGAAAATACCTTCAACGGCAGCAAATGCAATTACACGTTCACCAA---A 26553
Query 4712 GCTGGCTTTGTCTT-----TAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCAC 4766
| |||| | ||| |||||| | ||||| | || || ||| |||
Sbjct 26552 GTTGGC--CGACTTCGAGGAAATCCAAGCAAGCGCCCAATCTGCCTTACGCTTTACGGCA 26495
Query 4767 GGAATTGTGTATATAGCGTTAAATA---ATTTACTTT-TTTCAAATGGGTCTTGAATATA 4822
|| ||||| | |||||| || |||| | || |||| |||| | ||| | ||||||
Sbjct 26494 GGCATTGTCTCTATAGCATTGAATAAGTAATTCCTTTGTTTC----GAGTCCTTAATATA 26439
Query 4823 AGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCC 4882
|| || |||| || |||||||||||||||||| | ||| || || ||||| ||||||||
Sbjct 26438 TGTATCAATTAATATGCTATACATTTCAGAATGCACATTCTCCATCGCAATTTGAAATCC 26379
Query 4883 GTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTC 4942
|| ||||| | || ||||| ||||| ||||| | || || | ||| |||| |||||
Sbjct 26378 ATAGAAGCAACGTGCCTCTGTCACTTGGACTTCCTGGCAGAAGCGTTCAACTACATTTTC 26319
Query 4943 GTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTC 5002
|| || ||||| ||| || || ||||| || || || || || ||||| | ||||
Sbjct 26318 ATTCACAATACCATCAGATGCGGCGAAAAAGGCTAACACGTGTGAAATAAAATGTCGTTC 26259
Query 5003 GTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGT 5062
| | | || | ||| | || |||||||| | ||| ||||| | || ||
Sbjct 26258 ATTATCAGTTAGACGTGCCCAATCATCCATATCTTTAGAAAGATCTACTTCCCCTACTGT 26199
Query 5063 CCAAAACGACGCTTCCGC 5080
||| ||||| ||||| ||
Sbjct 26198 CCAGAACGATGCTTCTGC 26181
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 426883258842680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |