Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq291 571 8e-158 seq225 248 1e-60 >seq291 Length=196152 Score = 571 bits (632), Expect = 8e-158 Identities = 1262/1878 (67%), Gaps = 21/1878 (1%) Strand=Plus/Minus Query 76773 TTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCA 76832 ||||||| ||||| || || | | | || ||||| ||||| | ||| ||||| ||| Sbjct 78048 TTATCCACAGTAAATTGTATAGCATTTGCAGCTGGTTTCGTACGCAAATAATACATGCCA 77989 Query 76833 GTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGA 76892 || || ||||| |||| ||||||||||| || || || || ||| | || Sbjct 77988 GTCTTGAGACCTGCCTTCCAGCCGTAGAAATGTATAGAAGTGAGCTTACCATAGTTGGGC 77929 Query 76893 TCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCC 76952 || || | || || || | ||||||||| ||||||||||| || || | ||| || ||| Sbjct 77928 TCAGCCACGTGTATGTTGAACGACTGACTCTGATCGATGAATGCACCACGATCTGCAGCC 77869 Query 76953 ATTTTTATAATGGTCTTTTGA--GGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATAT 77010 ||||| || | | |||| | | ||| ||||||| ||||||| | | | || | Sbjct 77868 ATTTTGAT--CGATGTTTTCACGGAAATCTCCCAAACAGTTTTGTATAGATCGCGTATGT 77811 Query 77011 CATCTGG-AAGGTTT--GTATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTA 77067 | ||| | || || ||||||| ||||| || | | | |||||| ||||||| | Sbjct 77810 GCTGTGGTATGGATTCAATATTTTGTATGGATCCGCGACTGGTTATAATATTATTCTTCA 77751 Query 77068 TATCATCATTCCACAATTTCC-TCTCTGTTAAAACTC-TAAGGAGATGAGGATTAACTAT 77125 ||||||||| ||||| || ||| |||| | | | ||| || ||| |||| || | Sbjct 77750 TATCATCATCCCACAGNACCCAACTCGGTTAGATCGCGTAACAAG-TGATGATTTACAAC 77692 Query 77126 TTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGA 77185 ||||||||| || || | || | ||| || |||||||| || || ||||| | || Sbjct 77691 TTGAAATTCACCCGAAAGCACACGACGTGTATAAATATTGGAAGTGTACGGTTCAAATGA 77632 Query 77186 TTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACT 77245 |||||||| |||| |||||| || || |||||||||||||| || || | || ||| Sbjct 77631 CTCATTGTTGCCCATAATTTGTGCTGTTGAAGCAGTTGGCATGGGCGCAAGCAGCAAAGA 77572 Query 77246 ATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGA 77305 || | || ||||||| | ||||| || || | | |||||| ||||||||| | Sbjct 77571 GTTGCGGACACCATGTTGCTTTATTTTCTCCTTCAATTCGGTCCAATTCCAAAGATCAGT 77512 Query 77306 AGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATA 77365 ||| |||||| | || || |||||||| || |||||| | ||| || ||||| Sbjct 77511 TGGTGTTTTATCCCACATGTCATACTGTAGAATACCCTTACTAACGGGTGAACCTTTATA 77452 Query 77366 TGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATA 77425 |||||||| | || | ||||||||| ||| ||||| |||||||| || || || || Sbjct 77451 CGTTTCATAGGTGCCATAGTTTTCAGCTAATTCGCAACTGGCTTCCAAGGCGCCATAGTA 77392 Query 77426 AATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATG 77485 ||| |||||||| || | || ||| | | |||||| ||| || | || ||| | Sbjct 77391 AATAGTTTCGAATATTTGCTGATTCAAACGGAATGCTTCTTCACTTTCGTATGGGTAACG 77332 Query 77486 TAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTT 77545 | ||||| || || || || || || || | ||||||||||| || | |||||| Sbjct 77331 CATTAGAATTAAAGCGTCGGCAAAACCTTGTATGCCAATACCAATGGGACGATGTCTGAA 77272 Query 77546 ATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATT 77605 ||| || | | || || || | ||||||| |||||||||||| |||||||| ||||| Sbjct 77271 ATTCGATTTCCTTGCCTCCGGCAAGGGATAATGATTAATGTCTATGATTTTATTCAGATT 77212 Query 77606 TCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAA--TCTTC-CATCTAT 77662 | ||| || || || || || ||| ||| | | ||| | | | Sbjct 77211 ACGTGTAACGGTCTTTGTGACTTCTTTGAGGCGCTTAAAGTCATACGTTTTCTCGGGTGT 77152 Query 77663 AACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGC 77722 |||||||| ||||| || || || || | || || || |||||||||| | | Sbjct 77151 GACAAACATATTCAAGGCGATCGAAGCCAAGTTGCACACAGCTACCTCATCGGGTGACGA 77092 Query 77723 ATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTT 77782 ||||| | || |||||||||| ||||||||| || || ||||| | ||| ||||| || Sbjct 77091 ATATTCCACAATTTCGGTACATAAATTACTACACTTAATTGTGCCAACATTCTGTTGATT 77032 Query 77783 GCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGA 77842 |||||| ||| || | || ||||| | || | || || ||||| || | || || Sbjct 77031 ACTCTTTCGATTACAAGCATCTTTATACAACATGTATGGTGTGCCGGTCTCCACTTGCGA 76972 Query 77843 TTCGATAATAGATTTCCAGACGACTCT-AGCTTTTATCATAGATTTGTATCGCCTCTCTC 77901 ||| ||||| | | | | |||| | |||||||| | ||| || | || Sbjct 76971 TTCAATAAT-GCTAAACCAAAGACTTTGTGCTTTTATTTTCTTATTGGCACGTCCTTCCT 76913 Query 77902 TTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGC 77961 |||||||| ||||| | ||| || || || ||||| || |||| || || || | Sbjct 76912 GTTCATATTTCAGATATAACTTTTCGAACTCTTCACCCCATACTTCATGTAAACCGGGAC 76853 Query 77962 ATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGAT 78021 | | | ||| ||||| | |||||||| |||| | | || ||||||||||| |||| Sbjct 76852 ACTTGTGTGGACACATTAGCGACCAGTCTTCATCGGCTTCTACACGTTTCATAAATAGAT 76793 Query 78022 CAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCT 78081 |||||||||||| ||| || | ||||| || | ||| ||||| || || || || | Sbjct 76792 CAGGTATCCATAAGGCATAGAACAAATCTCTGGCGCGATGCTCTTCTTTGCCAGTGTTTT 76733 Query 78082 TTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAA 78141 |||| | || | ||| || | |||||||| |||||||||||| || || || || | Sbjct 76732 TTTTCAATTCCAAAAATTCGAAAATATCAGCATGCCATGGTTCCAGGTAGATGGCAAAGG 76673 Query 78142 CTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCA 78201 | || ||||||||| || || ||||| | ||| | || | ||||| | |||| || Sbjct 76672 CGCCTGGTCGTTTACCGCCACCTTGATCCACATAGCGTGCTATATTATTGAACACTCGCA 76613 Query 78202 ACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGC 78261 |||| || | | ||| || ||||| | |||||| || ||| | | || |||| | Sbjct 76612 ACATAGGCACCAAACCATTTGATGTGCTATTTGTACCCACAATTGCAGTGCCTTTTGCAC 76553 Query 78262 GAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCA---AC 78318 | || | | | | || || || || || || || || | || || | Sbjct 76552 GTATGCAATGTACGTTCAGACCAATACCGCCAGCAGATTTGGAAATCAATGCACATTGAT 76493 Query 78319 GTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGC 78378 || |||| | | ||||| || || || |||| |||| | || ||||| || Sbjct 76492 GTGCAGATGT---GAAAATACCATCAATGGAATCGTCCACCATGGTCAGTAGAAAGCATG 76436 Query 78379 TAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACC 78438 |||| ||| | || ||| | ||| || | || ||||| ||||| ||||| Sbjct 76435 ATGACAATTGCGGCTGCTTAGTGGCAGCAGCGAAAAGCGTTGGAGAAGCATGTGTAAAAT 76376 Query 78439 ATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTC 78498 | ||| ||||| | ||||| ||||| || |||| || ||||| ||| || | Sbjct 76375 AACGTTCGGAAAGCAAGTTGTAAGTTTCGATTGCTGCATCGATGTCTTCGCCATGTATAC 76316 Query 78499 CTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCA 78558 | | || |||||||| ||||||||||| |||| ||||| | || || | ||| | Sbjct 76315 CGATGGCAACACGCATTAACATATGCTGTGGTCGCTCAACAATTTTGCCGTTCAATTTTA 76256 Query 78559 ACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGT 78618 ||| || || ||| | ||||||||||||||||| || || ||| || | | | Sbjct 76255 GCAAATAGGAACGTTCAAGCGTTTTAAAACCAAAATAATTATAACCAAAATCGCGGGCAT 76196 Query 78619 AAATAATAACAGAATTTA 78636 ||||||| |||| |||| Sbjct 76195 AAATAATGGCAGAGTTTA 76178 Score = 113 bits (124), Expect = 6e-20 Identities = 216/316 (68%), Gaps = 7/316 (2%) Strand=Plus/Minus Query 76773 TTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCA 76832 ||||||| ||||| || || | | | || ||||| ||||| | ||| ||||| ||| Sbjct 85124 TTATCCACAGTAAATTGTATAGCATTTGCAGCTGGTTTCGTACGCAAATAATACATGCCA 85065 Query 76833 GTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGA 76892 || || ||||| |||| ||||||||||| || || || || ||| | || Sbjct 85064 GTCTTGAGACCTGCCTTCCAGCCGTAGAAATGTATAGAAGTGAGCTTACCATAGTTGGGC 85005 Query 76893 TCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCC 76952 || || | || || || | ||||||||| ||||||||||| || || | ||| || ||| Sbjct 85004 TCAGCCACGTGTATGTTGAACGACTGACTCTGATCGATGAATGCACCACGATCTGCAGCC 84945 Query 76953 ATTTTTATAATGGTCTTTTGA--GGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATAT 77010 ||||| || | | |||| | | ||| ||||||| |||||| | | | || | Sbjct 84944 ATTTTGAT--CGATGTTTTCACGGAAATCTCCCAAACTGTTTTGTATAGATCGCGTATGT 84887 Query 77011 CATCTGGAAGG---TTTGTATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTA 77067 | ||| | | | ||||||| ||||| || | | | |||||| ||||||| | Sbjct 84886 GCTGTGGTATGCATTCAATATTTTGTATGGATCCGCGACTGGTTATAATATTATTCTTCA 84827 Query 77068 TATCATCATTCCACAA 77083 ||||||||| |||||| Sbjct 84826 TATCATCATCCCACAA 84811 >seq225 Length=233467 Score = 248 bits (274), Expect = 1e-60 Identities = 387/552 (70%), Gaps = 5/552 (1%) Strand=Plus/Minus Query 48123 AAATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAAT 48182 ||||||| ||||| |||||||| || ||||||||||| || ||||||| ||||| | Sbjct 26731 AAATGTTGGAACATCAAACATGCGAAGTCACAATGAAGTCCCTCATCTCGTGAAATTAGT 26672 Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242 || || |||||||| | || ||||||| |||||||| || ||||| || || | || Sbjct 26671 TCATTGGAAAATGTCAAGCCTGGCATTAAACCACGTTTCTTAAGCCAGAAGATCGAAGCA 26612 Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAA 48302 ||| ||| ||||| || ||||| ||||| |||||||| | | | || || | Sbjct 26611 AAACTGCCACTGAAGAAAATACCTTCAACGGCAGCAAATGCAATTACACGTTCACCAAAG 26552 Query 48303 CTGGC----TTCGTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGG 48358 |||| |||| | ||||| | |||||||| ||||| |||||| ||| Sbjct 26551 TTGGCCGACTTCGAGGAA-ATCCAAGCAAGCGCCCAATCTGCCTTACGCTTTACGGCAGG 26493 Query 48359 CATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATC 48418 |||||| ||||||||||| || | | || ||| || || |||| || ||||| Sbjct 26492 CATTGTCTCTATAGCATTGAATAAGTAATTCCTTTGTTTCGAGTCCTTAATATATGTATC 26433 Query 48419 TATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAA 48478 ||||| | ||||||||||| || || | ||| || || || || |||||||| || || Sbjct 26432 AATTAATATGCTATACATTTCAGAATGCACATTCTCCATCGCAATTTGAAATCCATAGAA 26373 Query 48479 ACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTAC 48538 || | || ||||| | || || ||| || || |||||| | | ||| ||||| || Sbjct 26372 GCAACGTGCCTCTGTCACTTGGACTTCCTGGCAGAAGCGTTCAACTACATTTTCATTCAC 26313 Query 48539 TATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGA 48598 || |||||| || || ||||| ||||| || ||| |||||||| | ||| || Sbjct 26312 AATACCATCAGATGCGGCGAAAAAGGCTAACACGTGTGAAATAAAATGTCGTTCATTATC 26253 Query 48599 AGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAA 48658 ||| || ||| |||| |||||||| || | ||||||||| | ||||||| || Sbjct 26252 AGTTAGACGTGCCCAATCATCCATATCTTTAGAAAGATCTACTTCCCCTACTGTCCAGAA 26193 Query 48659 TGATGCCTCTGC 48670 ||||| ||||| Sbjct 26192 CGATGCTTCTGC 26181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694391279814400