Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq291 544 1e-149 seq225 255 8e-63 >seq291 Length=196152 Score = 544 bits (602), Expect = 1e-149 Identities = 1246/1853 (67%), Gaps = 31/1853 (2%) Strand=Plus/Minus Query 75398 GCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAA 75457 |||||||| ||||| | ||| ||||| ||||| || ||||| |||| ||||||||| Sbjct 78018 GCTGGTTTCGTACGCAAATAATACATGCCAGTCTTGAGACCTGCCTTCCAGCCGTAGAAA 77959 Query 75458 TGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATATTCATCGACTGACTT 75517 || || || || || ||| | || || || | || || || | ||||||||| Sbjct 77958 TGTATAGAAGTGAGCTTACCATAGTTGGGCTCAGCCACGTGTATGTTGAACGACTGACTC 77899 Query 75518 TGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGG--AATTT 75575 ||||||||||| || || | ||| || |||||||| || | | |||| | | ||| | Sbjct 77898 TGATCGATGAATGCACCACGATCTGCAGCCATTTTGATC--GATGTTTTCACGGAAATCT 77841 Query 75576 CCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA--GATTTG-TATTTTGAATGG 75632 |||||| ||||||| | | | || | | ||| | |||| ||||||| |||| Sbjct 77840 CCCAAACAGTTTTGTATAGATCGCGTATGTGCTGTGGTATGGATTCAATATTTTGTATGG 77781 Query 75633 ATCCGCCATCAGATATAATTGTATTCTTGATCTCATCATTCCACAATTTTCT-CTCGGTT 75691 |||||| | | |||||| ||||||| || ||||||| ||||| | ||||||| Sbjct 77780 ATCCGCGACTGGTTATAATATTATTCTTCATATCATCATCCCACAGNACCCAACTCGGTT 77721 Query 75692 AAAACTC-TAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGT 75750 | | | | ||| || ||| |||| |||| ||||||||| || || | || | || || Sbjct 77720 AGATCGCGTAACAAG-TGATGATTTACAACTTGAAATTCACCCGAAAGCACACGACGTGT 77662 Query 75751 GTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGA 75810 |||||||| || || ||||| | || |||||||| |||| |||||| || ||||| Sbjct 77661 ATAAATATTGGAAGTGTACGGTTCAAATGACTCATTGTTGCCCATAATTTGTGCTGTTGA 77602 Query 75811 AGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATC 75870 |||||| ||||| || || | || ||| || | || ||||||| | ||||| || Sbjct 77601 AGCAGTTGGCATGGGCGCAAGCAGCAAAGAGTTGCGGACACCATGTTGCTTTATTTTCTC 77542 Query 75871 TTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAG 75930 || | | |||||| ||||||||| | |||| |||||| | || || ||||| Sbjct 77541 CTTCAATTCGGTCCAATTCCAAAGATCAGTTGGTGTTTTATCCCACATGTCATACTGTAG 77482 Query 75931 AATTCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAG 75990 ||| || || ||| | ||| || ||||| ||||| || || || | |||||||||| Sbjct 77481 AATACCCTTACTAACGGGTGAACCTTTATACGTTTCATAGGTGCCATAGTTTTCAGCTAA 77422 Query 75991 TTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATC 76050 ||||||||| || || || || || || ||||| |||||||| || | || ||| | | Sbjct 77421 TTCGCAACTGGCTTCCAAGGCGCCATAGTAAATAGTTTCGAATATTTGCTGATTCAAACG 77362 Query 76051 TTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTG 76110 ||||| ||| || | || ||| | | ||||| || || || || | || || Sbjct 77361 GAATGCTTCTTCACTTTCGTATGGGTAACGCATTAGAATTAAAGCGTCGGCAAAACCTTG 77302 Query 76111 AACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTC--AGCTTCTGGAATAGGG 76168 | ||||||||||| || | |||||| ||| | ||||| || || || | || Sbjct 77301 TATGCCAATACCAATGGGACGATGTCTGAAATTCG--ATTTCCTTGCCTCCGGCAAGGGA 77244 Query 76169 TAATAATTAATATCTATAATTTTATTGAGATTTCTGACAACTACTTTAACCACGTCCTTT 76228 |||| |||||| ||||| |||||||| ||||| | ||| || || || || Sbjct 77243 TAATGATTAATGTCTATGATTTTATTCAGATTACGTGTAACGGTCTTTGTGACTTCTTTG 77184 Query 76229 AGTTTGAGAAAATCAAA--TTTTC-CATCTATCACAAACATATTAAGAGCTATAGATGCT 76285 || ||| ||| | ||||| | | | ||||||||||| | || || || || Sbjct 77183 AGGCGCTTAAAGTCATACGTTTTCTCGGGTGTGACAAACATATTCAAGGCGATCGAAGCC 77124 Query 76286 AGATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTA 76345 | || || || |||||||||| | | ||||| | || || || |||| |||| Sbjct 77123 AAGTTGCACACAGCTACCTCATCGGGTGACGAATATTCCACAATTTCGGTACATAAATTA 77064 Query 76346 CTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAA 76405 |||||||| || || |||| ||| ||||| || |||||| ||||| | || ||||| Sbjct 77063 CTACACTTAATTGTGCCAACATTCTGTTGATTACTCTTTCGATTACAAGCATCTTTATAC 77004 Query 76406 AGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCT- 76464 | | | || || || || || | || ||||| ||||| | | | | |||| | Sbjct 77003 AACATGTATGGTGTGCCGGTCTCCACTTGCGATTCAATAAT-GCTAAACCAAAGACTTTG 76945 Query 76465 AGCTTTTATTATAGATTTGTATCGCTTCTCTCT-TTCATATTGTGTATATAACCGTTCAA 76523 ||||||||| | ||| || | || || |||||||| ||||||| ||| | Sbjct 76944 TGCTTTTATTTTCTTATTGGCACG-TCCTTCCTGTTCATATTTCAGATATAACTTTTCGA 76886 Query 76524 ATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACT 76583 | || || ||||| || |||| ||||| ||||| | | |||||||| | ||||| | Sbjct 76885 ACTCTTCACCCCATACTTCATGTAAACCGGGACACTTGTGTGGACACATTAGCGACCAGT 76826 Query 76584 CACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGAT 76643 | |||| | | || ||||||||||| |||||||||||||||| ||| || | || Sbjct 76825 CTTCATCGGCTTCTACACGTTTCATAAATAGATCAGGTATCCATAAGGCATAGAACAAAT 76766 Query 76644 CTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATAT 76703 ||| || | | | ||||| || || || || ||||| | || | || || | ||||| Sbjct 76765 CTCTGGCGCGATGCTCTTCTTTGCCAGTGTTTTTTTTCAATTCCAAAAATTCGAAAATAT 76706 Query 76704 CAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGAT 76763 ||| |||||||||||| || || || || | | || ||||||||| || || |||| Sbjct 76705 CAGCATGCCATGGTTCCAGGTAGATGGCAAAGGCGCCTGGTCGTTTACCGCCACCTTGAT 76646 Query 76764 CTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTAC 76823 | | ||| | || | ||||| | |||| |||||| || | | || || ||||| | Sbjct 76645 CCACATAGCGTGCTATATTATTGAACACTCGCAACATAGGCACCAAACCATTTGATGTGC 76586 Query 76824 CATTTGTTCCAGAAATATAACTTCCACATGCACGAAT---AT-TACTAATAGATAGGCCT 76879 |||||| || ||| | | || |||||| || || ||| ||| || Sbjct 76585 TATTTGTACCCACAATTGCAGTGCCTTTTGCACGTATGCAATGTACGTTCAGA----CCA 76530 Query 76880 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCG-TTTCAATGTGTCATAGATGCCCTC 76938 || || || || ||| || || | ||||| | | | | ||| | | || || || Sbjct 76529 ATACCGCCAGCAGATTTGGAAATCAATGCACATTGATGTGCAGATGTGA-AAATACCATC 76471 Query 76939 TATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCC 76998 || ||| |||| |||| | || ||||| || |||| ||| | || ||| | Sbjct 76470 AATGGAATCGTCCACCATGGTCAGTAGAAAGCATGATGACAATTGCGGCTGCTTAGTGGC 76411 Query 76999 TGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGT 77058 ||| || | || ||||| ||||| || || | ||| ||||| | ||||| || Sbjct 76410 AGCAGCGAAAAGCGTTGGAGAAGCATGTGTAAAATAACGTTCGGAAAGCAAGTTGTAAGT 76351 Query 77059 TTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATG 77118 ||| || |||| || || || ||| || || | || |||||||| |||||||| Sbjct 76350 TTCGATTGCTGCATCGATGTCTTCGCCATGTATACCGATGGCAACACGCATTAACATATG 76291 Query 77119 CTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTT 77178 ||| ||||| || ||| | || || | ||| | ||| || || ||| | ||||| Sbjct 76290 CTGTGGTCGCTCAACAATTTTGCCGTTCAATTTTAGCAAATAGGAACGTTCAAGCGTTTT 76231 Query 77179 AAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTA 77231 |||||||||||| || || ||| || | | |||||||| | || |||| Sbjct 76230 AAAACCAAAATAATTATAACCAAAATCGCGGGCATAAATAATGGCAGAGTTTA 76178 Score = 116 bits (128), Expect = 5e-21 Identities = 200/286 (70%), Gaps = 7/286 (2%) Strand=Plus/Minus Query 75398 GCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAA 75457 |||||||| ||||| | ||| ||||| ||||| || ||||| |||| ||||||||| Sbjct 85094 GCTGGTTTCGTACGCAAATAATACATGCCAGTCTTGAGACCTGCCTTCCAGCCGTAGAAA 85035 Query 75458 TGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATATTCATCGACTGACTT 75517 || || || || || ||| | || || || | || || || | ||||||||| Sbjct 85034 TGTATAGAAGTGAGCTTACCATAGTTGGGCTCAGCCACGTGTATGTTGAACGACTGACTC 84975 Query 75518 TGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGA--GGAATTT 75575 ||||||||||| || || | ||| || |||||||| || | | |||| | | ||| | Sbjct 84974 TGATCGATGAATGCACCACGATCTGCAGCCATTTTGAT--CGATGTTTTCACGGAAATCT 84917 Query 75576 CCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA--GATT-TGTATTTTGAATGG 75632 |||||| |||||| | | | || | | ||| | ||| ||||||| |||| Sbjct 84916 CCCAAACTGTTTTGTATAGATCGCGTATGTGCTGTGGTATGCATTCAATATTTTGTATGG 84857 Query 75633 ATCCGCCATCAGATATAATTGTATTCTTGATCTCATCATTCCACAA 75678 |||||| | | |||||| ||||||| || ||||||| |||||| Sbjct 84856 ATCCGCGACTGGTTATAATATTATTCTTCATATCATCATCCCACAA 84811 >seq225 Length=233467 Score = 255 bits (282), Expect = 8e-63 Identities = 480/702 (68%), Gaps = 9/702 (1%) Strand=Plus/Minus Query 46464 ATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGTTTGAC 46523 ||| || || ||||| ||||| ||| | || |||||||| || || | || || Sbjct 26879 ATCAGCCACAAATTCGATATAATCGGACATTAGTTTGCAATTCATACCGATTAAATTCAC 26820 Query 46524 CGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATCGATGT 46583 ||| | ||| || || | || || || ||||| | ||||| || || ||||| | Sbjct 26819 CGGCAAAGCGTCAGTTAAGAATTCCTGCTCAATTTTAACAGCTTCAGAAATTAT---TTC 26763 Query 46584 TACTGTTTCCTCA---CTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAAATC 46640 || || |||| |||||| || || ||||||| ||||| |||||||| || || Sbjct 26762 AACAATTCGCTCATTACTTGGTTTTTGTATTAAATGTTGGAACATCAAACATGCGAAGTC 26703 Query 46641 ACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAG 46700 ||||||||| || ||||||| ||||| ||| || |||||||| | || ||||||| Sbjct 26702 ACAATGAAGTCCCTCATCTCGTGAAATTAGTTCATTGGAAAATGTCAAGCCTGGCATTAA 26643 Query 46701 TCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTAC 46760 ||||| || || ||||| || || | || ||| ||| ||||| || ||||| || Sbjct 26642 ACCACGTTTCTTAAGCCAGAAGATCGAAGCAAAACTGCCACTGAAGAAAATACCTTCAAC 26583 Query 46761 AGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATT--ATGAA-TCCACCTTTG 46817 || || ||||| | | | || || | |||| || | ||| |||| | Sbjct 26582 GGCAGCAAATGCAATTACACGTTCACCAAAGTTGGCCGACTTCGAGGAAATCCAAGCAAG 26523 Query 46818 AGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtt 46877 |||||||| ||||| |||||| ||||||||| ||||||||||| || | | || Sbjct 26522 CGCCCAATCTGCCTTACGCTTTACGGCAGGCATTGTCTCTATAGCATTGAATAAGTAATT 26463 Query 46878 tttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAAT 46937 ||| | || |||| ||||||||| ||||| | ||||||||||| ||||| | Sbjct 26462 CCTTTGTTTCGAGTCCTTAATATATGTATCAATTAATATGCTATACATTTCAGAATGCAC 26403 Query 46938 GTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGT 46997 || || || || || |||||||| || || || | ||| || || | || || || Sbjct 26402 ATTCTCCATCGCAATTTGAAATCCATAGAAGCAACGTGCCTCTGTCACTTGGACTTCCTG 26343 Query 46998 ACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAA 47057 || || |||||| | ||| |||||||| || |||||| || || ||||| || || Sbjct 26342 GCAGAAGCGTTCAACTACATTTTCATTCACAATACCATCAGATGCGGCGAAAAAGGCTAA 26283 Query 47058 TACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATCTTT 47117 || ||| |||||||| | ||||| ||| || ||| |||| |||||||| Sbjct 26282 CACGTGTGAAATAAAATGTCGTTCATTATCAGTTAGACGTGCCCAATCATCCATATCTTT 26223 Query 47118 TGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGC 47159 || | ||||||||| | |||||||||| || || ||||| Sbjct 26222 AGAAAGATCTACTTCCCCTACTGTCCAGAACGATGCTTCTGC 26181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712649582707200