Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq749 113 4e-20 seq2732 98.7 8e-16 >seq749 Length=113903 Score = 113 bits (124), Expect = 4e-20 Identities = 164/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 111097 AAAATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCC 111156 ||||||||||| || || || || ||||| ||||| ||||| || |||| ||||| Sbjct 1169 AAAATGCAAATCTTCGTGAAGACCTTGACTGGCAAGACCATCACTCTGGAGGTTGAACCA 1110 Query 111157 AGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGAT 111216 |||| || ||| | || ||| || ||| ||||||||||| | ||| ||| Sbjct 1109 TCCGATACTATTGAAAATGTTAAAGCTAAGATTCAAGACAAAGAAGGAATCCCCCCAGAT 1050 Query 111217 CAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 111276 |||||| | | || | ||| || |||||| ||||||| ||| || ||||||| Sbjct 1049 CAACAACGTTTAATCTTTGCCGGTAAACAACTGGAAGACGGACGCACTCTGTCCGATTAC 990 Query 111277 AATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111328 || || || || || |||||||| ||||| || | ||||| || ||||||| Sbjct 989 AACATCCAGAAGGAGTCTACACTTCATTTGGTTCTTCGTCTACGTGGTGGCA 938 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 |||||||| || || ||||| ||||| || ||||| ||||| |||| ||||| | Sbjct 710 ATGCAAATCTTCGTTAAAACTTTGACGGGTAAAACAATTACTCTGGAGGTTGAACCTTCC 651 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | ||| | || ||| ||||||| ||||| || || |||| |||||| Sbjct 650 GATACAATTGAAAACGTTAAAGCAAAAATTCAGGACAAGGAGGGTATTCCTCCAGATCAA 591 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||| | | || | || || || ||||||||||| || || ||||||| || Sbjct 590 CAACGTTTAATCTTCGCCGGTAAGCAATTGGAAGACGGACGTACCTTGTCCGATTACAAC 531 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || ||||| |||||||| || || || || |||||||| |||||||| Sbjct 530 ATCCAAAAGGAATCTACTCTTCACTTGGTATTGCGTCTCCGCGGTGG 484 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| ||||| |||||||| ||||| || |||||||| || |||| || || | Sbjct 938 ATGCAGATTTTCGTCAAAACTTTGACGGGAAAAACCATCACTTTGGAGGTTGAGCCTTCC 879 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | ||| | || ||| |||||| || || ||||| | ||| |||||| Sbjct 878 GATACCATTGAGAATGTCAAAGCTAAAATTCAAGATAAGGAAGGAATCCCCCCAGATCAA 819 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||| | | |||| || |||||||| ||||| ||| || || |||| |||||| Sbjct 818 CAACGTTTGATTTTCGCTGGCAAACAGTTGGAGGATGGACGCACACTGTCCGACTATAAT 759 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || ||||| ||||| || ||||||||||| | || | || ||||| Sbjct 758 ATTCAAAAGGAATCCACTCTACATTTAGTTCTACGCTTACGTGGTGG 712 Score = 93.3 bits (102), Expect = 4e-14 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 ||||||||| || || || || | || ||||||||||||||| |||| ||||| Sbjct 255 AATGCAAATCTTCGTGAAGACCCTCACTGGCAAAACCATTACCTTGGANGTTGAACCTTC 196 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 ||| | ||| | || || || || || || |||||| ||||| ||||| Sbjct 195 AGATACCATTGAGAACGTTAAGGCTAAGATCCAAGATAAGGAAGGCATTCCCCCAGATCA 136 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 ||| | | || | || |||||||||||||| || || || ||||||| || Sbjct 135 GCAACGTTTGATCTTCGCCGGCAAACAATTGGAGGACGGACGTACCTTGTCCGATTACAA 76 Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || |||||||| ||||| || || || || |||||||| || ||||| Sbjct 75 CATCCAAAAAGAGTCTACTCTTCACTTGGTATTGCGTCTCCGTGGTGG 28 >seq2732 Length=47336 Score = 98.7 bits (108), Expect = 8e-16 Identities = 179/260 (69%), Gaps = 3/260 (1%) Strand=Plus/Minus Query 111083 TTTATAAGA--GTTTAAAAATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTAC 111140 ||| ||||| ||| | ||||||||| || || ||||| | || || || ||||| || Sbjct 1851 TTTGTAAGATTGTTCAGCAATGCAAATATTCGTAAAAACCCTTACGGGTAAGACCATCAC 1792 Query 111141 CGTGGAAACGGAACCCAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGA 111200 | || || || ||| || ||| || || || |||||| || || || Sbjct 1791 TCTTGAGGTTGAGCCTTCGGATACTATTGAACATGTTAAGGCCAAAATTCAAGATAAGGA 1732 Query 111201 AGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAA 111260 ||| |||| |||||||| | || |||| ||| || || |||||||||||| | Sbjct 1731 AGGAATTCCGCCTGATCAACAGCGTCTAATTTTTGCCGGAAAGCAATTGGAAGATGGTCG 1672 Query 111261 AACTATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCG 111320 || |||| || |||||||| || ||||| |||||| | |||||||| | ||||| | Sbjct 1671 CACATTGGCTGACTATAATATTCAGAAAGAGTCTACATTGCATTTAGTACTTCGTCTTAG 1612 Query 111321 CGGTGGCAATAAATAAACGT 111340 |||||| ||| |||||| Sbjct 1611 AGGTGGC-GCAAAGAAACGT 1593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421646899264960