Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21]
31,960 sequences; 519,005,690 total letters
Query= NC_031761.1
Length=131855
Score E
Sequences producing significant alignments: (Bits) Value
seq749 113 4e-20
seq2732 98.7 8e-16
>seq749
Length=113903
Score = 113 bits (124), Expect = 4e-20
Identities = 164/232 (71%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 111097 AAAATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCC 111156
||||||||||| || || || || ||||| ||||| ||||| || |||| |||||
Sbjct 1169 AAAATGCAAATCTTCGTGAAGACCTTGACTGGCAAGACCATCACTCTGGAGGTTGAACCA 1110
Query 111157 AGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGAT 111216
|||| || ||| | || ||| || ||| ||||||||||| | ||| |||
Sbjct 1109 TCCGATACTATTGAAAATGTTAAAGCTAAGATTCAAGACAAAGAAGGAATCCCCCCAGAT 1050
Query 111217 CAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 111276
|||||| | | || | ||| || |||||| ||||||| ||| || |||||||
Sbjct 1049 CAACAACGTTTAATCTTTGCCGGTAAACAACTGGAAGACGGACGCACTCTGTCCGATTAC 990
Query 111277 AATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111328
|| || || || || |||||||| ||||| || | ||||| || |||||||
Sbjct 989 AACATCCAGAAGGAGTCTACACTTCATTTGGTTCTTCGTCTACGTGGTGGCA 938
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159
|||||||| || || ||||| ||||| || ||||| ||||| |||| ||||| |
Sbjct 710 ATGCAAATCTTCGTTAAAACTTTGACGGGTAAAACAATTACTCTGGAGGTTGAACCTTCC 651
Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219
||| | ||| | || ||| ||||||| ||||| || || |||| ||||||
Sbjct 650 GATACAATTGAAAACGTTAAAGCAAAAATTCAGGACAAGGAGGGTATTCCTCCAGATCAA 591
Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279
||| | | || | || || || ||||||||||| || || ||||||| ||
Sbjct 590 CAACGTTTAATCTTCGCCGGTAAGCAATTGGAAGACGGACGTACCTTGTCCGATTACAAC 531
Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326
|| ||||| |||||||| || || || || |||||||| ||||||||
Sbjct 530 ATCCAAAAGGAATCTACTCTTCACTTGGTATTGCGTCTCCGCGGTGG 484
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159
||||| ||||| |||||||| ||||| || |||||||| || |||| || || |
Sbjct 938 ATGCAGATTTTCGTCAAAACTTTGACGGGAAAAACCATCACTTTGGAGGTTGAGCCTTCC 879
Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219
||| | ||| | || ||| |||||| || || ||||| | ||| ||||||
Sbjct 878 GATACCATTGAGAATGTCAAAGCTAAAATTCAAGATAAGGAAGGAATCCCCCCAGATCAA 819
Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279
||| | | |||| || |||||||| ||||| ||| || || |||| ||||||
Sbjct 818 CAACGTTTGATTTTCGCTGGCAAACAGTTGGAGGATGGACGCACACTGTCCGACTATAAT 759
Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326
|| ||||| ||||| || ||||||||||| | || | || |||||
Sbjct 758 ATTCAAAAGGAATCCACTCTACATTTAGTTCTACGCTTACGTGGTGG 712
Score = 93.3 bits (102), Expect = 4e-14
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158
||||||||| || || || || | || ||||||||||||||| |||| |||||
Sbjct 255 AATGCAAATCTTCGTGAAGACCCTCACTGGCAAAACCATTACCTTGGANGTTGAACCTTC 196
Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218
||| | ||| | || || || || || || |||||| ||||| |||||
Sbjct 195 AGATACCATTGAGAACGTTAAGGCTAAGATCCAAGATAAGGAAGGCATTCCCCCAGATCA 136
Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278
||| | | || | || |||||||||||||| || || || ||||||| ||
Sbjct 135 GCAACGTTTGATCTTCGCCGGCAAACAATTGGAGGACGGACGTACCTTGTCCGATTACAA 76
Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326
|| |||||||| ||||| || || || || |||||||| || |||||
Sbjct 75 CATCCAAAAAGAGTCTACTCTTCACTTGGTATTGCGTCTCCGTGGTGG 28
>seq2732
Length=47336
Score = 98.7 bits (108), Expect = 8e-16
Identities = 179/260 (69%), Gaps = 3/260 (1%)
Strand=Plus/Minus
Query 111083 TTTATAAGA--GTTTAAAAATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTAC 111140
||| ||||| ||| | ||||||||| || || ||||| | || || || ||||| ||
Sbjct 1851 TTTGTAAGATTGTTCAGCAATGCAAATATTCGTAAAAACCCTTACGGGTAAGACCATCAC 1792
Query 111141 CGTGGAAACGGAACCCAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGA 111200
| || || || ||| || ||| || || || |||||| || || ||
Sbjct 1791 TCTTGAGGTTGAGCCTTCGGATACTATTGAACATGTTAAGGCCAAAATTCAAGATAAGGA 1732
Query 111201 AGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAA 111260
||| |||| |||||||| | || |||| ||| || || |||||||||||| |
Sbjct 1731 AGGAATTCCGCCTGATCAACAGCGTCTAATTTTTGCCGGAAAGCAATTGGAAGATGGTCG 1672
Query 111261 AACTATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCG 111320
|| |||| || |||||||| || ||||| |||||| | |||||||| | ||||| |
Sbjct 1671 CACATTGGCTGACTATAATATTCAGAAAGAGTCTACATTGCATTTAGTACTTCGTCTTAG 1612
Query 111321 CGGTGGCAATAAATAAACGT 111340
|||||| ||| ||||||
Sbjct 1611 AGGTGGC-GCAAAGAAACGT 1593
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421646899264960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |