Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq225 242 4e-59 >seq225 Length=233467 Score = 242 bits (268), Expect = 4e-59 Identities = 468/688 (68%), Gaps = 2/688 (0%) Strand=Plus/Minus Query 23343 ATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTAC 23402 ||| || |||||||| ||||| | |||| | | | || ||||| |||| || || Sbjct 26879 ATCAGCCACAAATTCGATATAATCGGACATTAGTTTGCAATTCATACCGATTAAATTCAC 26820 Query 23403 TGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAAC 23462 || | || ||| ||||||| | ||||| |||||| || |||||||| ||| Sbjct 26819 CGGCAAAGCGTCAGTTAAGAATTCCTGCTCAATTTTAACAGCTTCAGAAATTATTTCAAC 26760 Query 23463 AATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAACAATAAACATGCAAAATCACA 23522 ||| || | ||| ||| | | |||||| | |||| |||||||| || ||||| Sbjct 26759 AATTCGCTCATTACTTGGTTTTTGTATTAAATGTTGGAACATCAAACATGCGAAGTCACA 26700 Query 23523 ATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCC 23582 ||| || || ||||| | ||| | |||||| |||||||| || ||||||||||| || Sbjct 26699 ATGAAGTCCCTCATCTCGTGAAATTAGTTCATTGGAAAATGTCAAGCCTGGCATTAAACC 26640 Query 23583 TCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGC 23642 ||||| |||| ||| || || | |||||| || ||||||||||| ||||| || Sbjct 26639 ACGTTTCTTAAGCCAGAAGATCGAAGCAAAACTGCCACTGAAGAAAATACCTTCAACGGC 26580 Query 23643 CGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGT 23702 ||||| || | | |||| |||||| | || | |||||||| | Sbjct 26579 AGCAAATGCAATTACACGTTCACCAAAGTTGGCCGACTTCGAGGAAATCCAAGCAAGCGC 26520 Query 23703 CCAATTAGCCTTCAATTTTAC-ACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTT 23761 ||||| ||||| ||||| || | ||||| || || || || || | || | Sbjct 26519 CCAATCTGCCTTACGCTTTACGGCAGGC-ATTGTCTCTATAGCATTGAATAAGTAATTCC 26461 Query 23762 TTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATAT 23821 ||| || || | |||||||||||||||| || ||||||||||||||||| | || Sbjct 26460 TTTGTTTCGAGTCCTTAATATATGTATCAATTAATATGCTATACATTTCAGAATGCACAT 26401 Query 23822 TTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAA 23881 | || || ||||| ||||| ||||| || || | || || | || ||| || || | Sbjct 26400 TCTCCATCGCAATTTGAAATCCATAGAAGCAACGTGCCTCTGTCACTTGGACTTCCTGGC 26341 Query 23882 AAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAA 23941 | || | || | ||| |||||| || |||||||||||| || || || || || | | Sbjct 26340 AGAAGCGTTCAACTACATTTTCATTCACAATACCATCAGATGCGGCGAAAAAGGCTAACA 26281 Query 23942 CATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAATCATTAATATCTTTTG 24001 | | | |||||||||| ||||| | | || | |||||||| |||||||| | Sbjct 26280 CGTGTGAAATAAAATGTCGTTCATTATCAGTTAGACGTGCCCAATCATCCATATCTTTAG 26221 Query 24002 ATAAATCAACTTCATCAACTGTCCAAAA 24029 | | ||| ||||| | |||||||| || Sbjct 26220 AAAGATCTACTTCCCCTACTGTCCAGAA 26193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521279665544000