Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq749 147 2e-30 seq609 84.2 2e-11 seq1128 82.4 5e-11 >seq749 Length=113903 Score = 147 bits (162), Expect = 2e-30 Identities = 177/236 (75%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || | || | ||| |||| |||||| || ||| |||||||||||||| Sbjct 21 TTGCATACCACCACGGAGACGCAATACCAAGTGAAGAGTAGACTCTTTTTGGATGTTGTA 80 Query 44164 ATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222 ||||| | || | || |||| |||| || || ||||| ||||||||||| ||||||| Sbjct 81 ATCGGACAAGGT-ACGTCCGTCCTCCAATTGTTTGCCGGCGAAGATCAAACGTTGCTGAT 139 Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCG 44281 ||| || | |||||||| || ||||| || | || |||| | ||||| || | Sbjct 140 CTGGGGGAATGCCTTCCTTATCTTGGATCTT-AGCCTTAACGTTCTCAATGGTATCTGAA 198 Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||| || |||| ||||| || || || |||||||||||||||||||||||||| Sbjct 199 GGTTCAACNTCCAAGGTAATGGTTTTGCCAGTGAGGGTCTTCACGAAGATTTGCAT 254 Score = 138 bits (152), Expect = 8e-28 Identities = 173/235 (74%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| || | || | ||| |||| |||||| || |||||| ||||||||||| Sbjct 249 TTGCATTCCACCACGGAGACGCAATACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTA 308 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 |||| | | ||| |||| |||| ||||| ||||| ||||||||||| || ||||| Sbjct 309 GTCGGACAATGTGCGTCCGTCCTCCAATTGCTTACCGGCGAAGATCAAACGTTGTTGATC 368 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGG 44282 || ||| | ||| ||||| || ||||| || | | |||| | ||||| || | | Sbjct 369 TGGAGGAATACCCTCCTTATCTTGGATCTT-GGCCTTTACGTTCTCAATGGTATCTGAAG 427 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || |||| || || || || || ||||||||||| |||||||||||||| Sbjct 428 GCTCAACTTCCAAAGTGATGGTTTTGCCGGTGAGGGTCTTTACGAAGATTTGCAT 482 Score = 136 bits (150), Expect = 3e-27 Identities = 175/236 (74%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || | || | ||| |||| |||||| || ||||||||||||||||| Sbjct 477 TTGCATACCACCGCGGAGACGCAATACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTA 536 Query 44164 ATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222 ||||| | || | || |||| |||| ||||| ||||| ||||| ||||| || |||| Sbjct 537 ATCGGACAAGGT-ACGTCCGTCTTCCAATTGCTTACCGGCGAAGATTAAACGTTGTTGAT 595 Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG-TTCCTATGGTGTCGGCG 44281 ||| ||| | ||| ||||| ||| | | || ||||| || | || | || || |||| Sbjct 596 CTGGAGGAATACCCTCCTTGTCC-TGAATTTTTGCTTTAACGTTTTCAATTGTATCGGAA 654 Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||| ||||||| ||||| || || ||||| | || || |||||||||||||| Sbjct 655 GGTTCAACCTCCAGAGTAATTGTTTTACCCGTCAAAGTTTTAACGAAGATTTGCAT 710 Score = 129 bits (142), Expect = 4e-25 Identities = 156/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||||| || |||||| |||||||||||||||| || ||| |||| ||| Sbjct 958 ACCAAATGAAGTGTAGACTCCTTCTGGATGTTGTAATCGGACAGAGTGCGTCCGTCTTCC 1017 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || || || ||||||||||| ||||| || ||||||| || | ||||| || || Sbjct 1018 AGTTGTTTACCGGCAAAGATTAAACGTTGTTGATCTGGGGGGATTCCTTCTTTGTCTTGA 1077 Query 44249 ATCTTCTGCTTCAA-TGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| |||| || || | || || |||| | ||| ||||||| || || ||||| Sbjct 1078 ATCTT-AGCTTTAACATTTTCAATAGTATCGGATGGTTCAACCTCCAGAGTGATGGTCTT 1136 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | ||||||||||||||||||||| Sbjct 1137 GCCAGTCAAGGTCTTCACGAAGATTTGCAT 1166 >seq609 Length=128410 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAA 44204 |||||||||||||||||| |||| | || | || | || |||| || || ||||| | Sbjct 92935 CTCCTTTTGGATGTTGTAGTCGGACAAGGTA-CGACCATCTTCCAATTGTTTTCCGGCGA 92877 Query 44205 AGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG 44264 ||||||||||||| ||||||| || | ||| || || || || || || | Sbjct 92876 AGATCAAACGCTGTTGATCTGGGGGGATACCCTCTTTGTCTTGGATTTTAGCTTTGACAT 92817 Query 44265 TTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324 || | |||||||| | | || ||||| | || || ||||| || || | ||| || | Sbjct 92816 TTTCGATGGTGTCAGAAGGCTCGACCTCTAAGGTGATGGTCTTACCAGTTAAGGTTTTGA 92757 Query 44325 CGAAGATTTGCAT 44337 |||| || ||||| Sbjct 92756 CGAAAATCTGCAT 92744 >seq1128 Length=88325 Score = 82.4 bits (90), Expect = 5e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 ||||| || || ||||| |||| | || | || || || ||||| ||||| ||| Sbjct 301 TCCTTCTGTATATTGTAGTCGGACAAAGTACGTCCATCCTCAAGTTGCTTGCCGGCGAAG 242 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 |||||||| || ||||||| || | || ||||| || || || |||| | || Sbjct 241 ATCAAACGTTGTTGATCTGGTGGGATTCCCTCCTTATCTTGGATTTTG-GCTTTGACATT 183 Query 44267 C-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | | ||||| || | | || || |||| || || || || || ||||| |||||||| Sbjct 182 CTCAATGGTATCCGAAGGCTCAACTTCCAAGGTGATTGTTTTGCCGGTGAGAGTCTTCAC 123 Query 44326 GAAGATTTGCAT 44337 |||||||||||| Sbjct 122 GAAGATTTGCAT 111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359850179239320