Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21]
31,960 sequences; 519,005,690 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq749 147 2e-30
seq609 84.2 2e-11
seq1128 82.4 5e-11
>seq749
Length=113903
Score = 147 bits (162), Expect = 2e-30
Identities = 177/236 (75%), Gaps = 4/236 (2%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || || | || | ||| |||| |||||| || ||| ||||||||||||||
Sbjct 21 TTGCATACCACCACGGAGACGCAATACCAAGTGAAGAGTAGACTCTTTTTGGATGTTGTA 80
Query 44164 ATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222
||||| | || | || |||| |||| || || ||||| ||||||||||| |||||||
Sbjct 81 ATCGGACAAGGT-ACGTCCGTCCTCCAATTGTTTGCCGGCGAAGATCAAACGTTGCTGAT 139
Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCG 44281
||| || | |||||||| || ||||| || | || |||| | ||||| || |
Sbjct 140 CTGGGGGAATGCCTTCCTTATCTTGGATCTT-AGCCTTAACGTTCTCAATGGTATCTGAA 198
Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| ||| || |||| ||||| || || || ||||||||||||||||||||||||||
Sbjct 199 GGTTCAACNTCCAAGGTAATGGTTTTGCCAGTGAGGGTCTTCACGAAGATTTGCAT 254
Score = 138 bits (152), Expect = 8e-28
Identities = 173/235 (74%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| |||||| || | || | ||| |||| |||||| || |||||| |||||||||||
Sbjct 249 TTGCATTCCACCACGGAGACGCAATACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTA 308
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
|||| | | ||| |||| |||| ||||| ||||| ||||||||||| || |||||
Sbjct 309 GTCGGACAATGTGCGTCCGTCCTCCAATTGCTTACCGGCGAAGATCAAACGTTGTTGATC 368
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGG 44282
|| ||| | ||| ||||| || ||||| || | | |||| | ||||| || | |
Sbjct 369 TGGAGGAATACCCTCCTTATCTTGGATCTT-GGCCTTTACGTTCTCAATGGTATCTGAAG 427
Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || |||| || || || || || ||||||||||| ||||||||||||||
Sbjct 428 GCTCAACTTCCAAAGTGATGGTTTTGCCGGTGAGGGTCTTTACGAAGATTTGCAT 482
Score = 136 bits (150), Expect = 3e-27
Identities = 175/236 (74%), Gaps = 4/236 (2%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || || | || | ||| |||| |||||| || |||||||||||||||||
Sbjct 477 TTGCATACCACCGCGGAGACGCAATACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTA 536
Query 44164 ATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222
||||| | || | || |||| |||| ||||| ||||| ||||| ||||| || ||||
Sbjct 537 ATCGGACAAGGT-ACGTCCGTCTTCCAATTGCTTACCGGCGAAGATTAAACGTTGTTGAT 595
Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG-TTCCTATGGTGTCGGCG 44281
||| ||| | ||| ||||| ||| | | || ||||| || | || | || || ||||
Sbjct 596 CTGGAGGAATACCCTCCTTGTCC-TGAATTTTTGCTTTAACGTTTTCAATTGTATCGGAA 654
Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| ||| ||||||| ||||| || || ||||| | || || ||||||||||||||
Sbjct 655 GGTTCAACCTCCAGAGTAATTGTTTTACCCGTCAAAGTTTTAACGAAGATTTGCAT 710
Score = 129 bits (142), Expect = 4e-25
Identities = 156/210 (74%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| ||||| || |||||| |||||||||||||||| || ||| |||| |||
Sbjct 958 ACCAAATGAAGTGTAGACTCCTTCTGGATGTTGTAATCGGACAGAGTGCGTCCGTCTTCC 1017
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|| || || ||||||||||| ||||| || ||||||| || | ||||| || ||
Sbjct 1018 AGTTGTTTACCGGCAAAGATTAAACGTTGTTGATCTGGGGGGATTCCTTCTTTGTCTTGA 1077
Query 44249 ATCTTCTGCTTCAA-TGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| |||| || || | || || |||| | ||| ||||||| || || |||||
Sbjct 1078 ATCTT-AGCTTTAACATTTTCAATAGTATCGGATGGTTCAACCTCCAGAGTGATGGTCTT 1136
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || | |||||||||||||||||||||
Sbjct 1137 GCCAGTCAAGGTCTTCACGAAGATTTGCAT 1166
>seq609
Length=128410
Score = 84.2 bits (92), Expect = 2e-11
Identities = 136/193 (70%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 44146 CTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAA 44204
|||||||||||||||||| |||| | || | || | || |||| || || ||||| |
Sbjct 92935 CTCCTTTTGGATGTTGTAGTCGGACAAGGTA-CGACCATCTTCCAATTGTTTTCCGGCGA 92877
Query 44205 AGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG 44264
||||||||||||| ||||||| || | ||| || || || || || || |
Sbjct 92876 AGATCAAACGCTGTTGATCTGGGGGGATACCCTCTTTGTCTTGGATTTTAGCTTTGACAT 92817
Query 44265 TTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324
|| | |||||||| | | || ||||| | || || ||||| || || | ||| || |
Sbjct 92816 TTTCGATGGTGTCAGAAGGCTCGACCTCTAAGGTGATGGTCTTACCAGTTAAGGTTTTGA 92757
Query 44325 CGAAGATTTGCAT 44337
|||| || |||||
Sbjct 92756 CGAAAATCTGCAT 92744
>seq1128
Length=88325
Score = 82.4 bits (90), Expect = 5e-11
Identities = 135/192 (70%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206
||||| || || ||||| |||| | || | || || || ||||| ||||| |||
Sbjct 301 TCCTTCTGTATATTGTAGTCGGACAAAGTACGTCCATCCTCAAGTTGCTTGCCGGCGAAG 242
Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266
|||||||| || ||||||| || | || ||||| || || || |||| | ||
Sbjct 241 ATCAAACGTTGTTGATCTGGTGGGATTCCCTCCTTATCTTGGATTTTG-GCTTTGACATT 183
Query 44267 C-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| | ||||| || | | || || |||| || || || || || ||||| ||||||||
Sbjct 182 CTCAATGGTATCCGAAGGCTCAACTTCCAAGGTGATTGTTTTGCCGGTGAGAGTCTTCAC 123
Query 44326 GAAGATTTGCAT 44337
||||||||||||
Sbjct 122 GAAGATTTGCAT 111
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359850179239320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |