Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21] 31,960 sequences; 519,005,690 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq157 118 1e-21 seq931 100 4e-16 >seq157 Length=290505 Score = 118 bits (130), Expect = 1e-21 Identities = 288/435 (66%), Gaps = 6/435 (1%) Strand=Plus/Plus Query 50473 AAGGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGCGCGTTACATAA 50532 |||| ||| |||| || ||||| |||||||| ||| | |||||||| || |||| || Sbjct 144641 AAGGTGATCTAGGCCCAGTTTATGGTTTTCAGTGGCGTCATTTTGGGGCCAAGTACAGAA 144700 Query 50533 ATTGCGACGTAAATTACGAAGGTCAAGGCGTGGATCAACTGCAAAAAATTATAACGACGT 50592 | ||| | | | |||| ||| | | || | |||||||| || || | || || Sbjct 144701 ACTGCAAGGACAGTTACAAAGATGAGGGTATAGATCAACTTCAGCAAGTAATTGACACAA 144760 Query 50593 TGAAAACAAACCCCGACGATCGGCGTATTTTAATGACCGCCTGGAATCCAACCGATATAG 50652 | | || || || | |||||||||||| ||||| | || |||||||| |||||| Sbjct 144761 TCAGAAACAATCCAAATGATCGGCGTATTATAATGTCTGCTTGGAATCCTGTCGATATCC 144820 Query 50653 ATCAAACCGTTTTACCTCCGTGTCATGTTTTATGTCAATTTTATGCCACAGACAAT---G 50709 ||||| | | |||| || |||||| | | ||||||| || | |||| | Sbjct 144821 CTCAAATGGCTCTACCACCTTGTCATTGTCTTGCACAATTTTTTG---TTGCCAATGGAG 144877 Query 50710 TTTTATCCTGTCAATGTTATCAAAGATCAGCTGATATGGGTTTAGGCGTTCCTTTCAACG 50769 ||||| ||||||| || ||| | || |||||||| || || || || || || Sbjct 144878 AATTATCTTGTCAATTATACCAACGCAGTGCCGATATGGGATTGGGTGTACCATTTAATA 144937 Query 50770 TAGCTTCTTACGCTTTATTAACGTATTTGATCGCTCAAGCCGTCGATATGAAACCGGGAG 50829 | || || |||||||| | || ||| |||| ||||| ||| | ||| || | Sbjct 144938 TTGCCTCGTACGCTTTGCTTACCTATATGATTGCTCATATTACTGATCTCCGACCAGGGG 144997 Query 50830 AATTTATTCATACGTTAGGAGACGCTCATATTTACCTCGATCACGTCGATGCTTTAAAGG 50889 | ||| | || || || || || || ||| | || |||| | || || ||||| | Sbjct 144998 ATTTTGTCCACACTTTGGGCGATGCACATGTCTATAATAATCATATTGAAGCATTAAAAG 145057 Query 50890 AGCAATTGACTCGAA 50904 | || || || |||| Sbjct 145058 AACAGTTAACGCGAA 145072 >seq931 Length=99288 Score = 100 bits (110), Expect = 4e-16 Identities = 182/267 (68%), Gaps = 12/267 (4%) Strand=Plus/Minus Query 155871 TTTAAAATTTGAAGACGCCCCTTTTCATCGGGTAATCCAATTTCTATCTTCAATTCCAAC 155930 || |||||||| | ||| |||| ||||| ||| || | ||| || || | | ||||| Sbjct 52150 TTCAAAATTTGCACACGACCCTCTTCATTGGGCAAACTAATCTCCATTTGTACCTCCAAG 52091 Query 155931 CGCCCAGGTCTTAATAATGCTTCGTCAATTAAGTCGGGTCTGTTGGTCATACCTATGATT 155990 || || |||| | || ||||||||||| | ||| | ||||| ||||| || || | Sbjct 52090 CGACCGGGTCGCAGCAAAGCTTCGTCAATCATGTCACGCCTGTTTGTCATGCCGATCACC 52031 Query 155991 AAAATGTTGTTTAAAGATTCTACACCGTCTATTTTAGACAATAATTGATTGACTACGGCG 156050 ||||||||||| | ||| ||||| || ||||||| | |||||||| || || | Sbjct 52030 AAAATGTTGTTCAGTTGTTCGACACCATCGATTTTAGCGAGCAATTGATTTACCACTGTA 51971 Query 156051 TCGTGCGTGGCGTTAT---CA---------CCGCGTTTTTTACACAGAGCATCTATTTCA 156098 ||||| | | ||| || || || ||| || | |||||||||||| Sbjct 51970 TCGTGTACGCCACTATTGCCAGCGACCGAGCCACGGGCTTTGCAGATCGCATCTATTTCA 51911 Query 156099 TCGAAGACGATAACGTGTAATCCGCTG 156125 ||||| | |||| || || |||||| Sbjct 51910 TCGAAAATTATAATATGCAAACCGCTG 51884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 666808703457600