Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20tryoni_20[genbank_20GCA_5F000695345.1_202014-05-21]
31,960 sequences; 519,005,690 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq749 145 2e-29
seq609 136 1e-26
seq1128 129 1e-24
>seq749
Length=113903
Score = 145 bits (160), Expect = 2e-29
Identities = 162/216 (75%), Gaps = 3/216 (1%)
Strand=Plus/Minus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| |||| |||||||| || | || || || || ||||| || ||||| |||
Sbjct 1169 AAAATGC---AAATCTTCGTGAAGACCTTGACTGGCAAGACCATCACTCTGGAGGTTGAA 1113
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
|| || || || || || || ||| |||||||| ||||||||||||||||| ||
Sbjct 1112 CCATCCGATACTATTGAAAATGTTAAAGCTAAGATTCAAGACAAAGAAGGAATCCCCCCA 1053
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
|| || ||||| | ||||| ||||| ||||| || ||||| ||| | ||||| |||||
Sbjct 1052 GATCAACAACGTTTAATCTTTGCCGGTAAACAACTGGAAGACGGACGCACTCTGTCCGAT 993
Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTT 178130
|| ||| |||| || || || ||||| ||| | |||
Sbjct 992 TACAACATCCAGAAGGAGTCTACACTTCATTTGGTT 957
Score = 138 bits (152), Expect = 3e-27
Identities = 162/217 (75%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| |||||||| || ||||| || ||||| || ||| | || || ||| |||||
Sbjct 251 CAAATCTTCGTGAAGACCCTCACTGGCAAAACCATTACCTTGGANGTTGAACCTTCAGAT 192
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| |||||||| || ||||| || || || ||||| || || || || ||||||
Sbjct 191 ACCATTGAGAACGTTAAGGCTAAGATCCAAGATAAGGAAGGCATTCCCCCAGATCAGCAA 132
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
|| | ||||||||||| ||||| | || || ||| | || |||| ||||||| ||| |
Sbjct 131 CGTTTGATCTTCGCCGGCAAACAATTGGAGGACGGACGTAC-CTTGTCCGATTACAACAT 73
Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139
||||||||| || || || || | || ||| | |||
Sbjct 72 CCAAAAAGAGTCTACTCTTCACTTGGTATTGCGTCTC 36
Score = 136 bits (150), Expect = 1e-26
Identities = 162/217 (75%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| |||||| | || || ||||| || || || ||||| ||| || ||
Sbjct 707 CAAATCTTCGTTAAAACTTTGACGGGTAAAACAATTACTCTGGAGGTTGAACCTTCCGAT 648
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || ||||| ||| ||| ||||||||||| || || || ||||| || || |||
Sbjct 647 ACAATTGAAAACGTTAAAGCAAAAATTCAGGACAAGGAGGGTATTCCTCCAGATCAACAA 588
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
|| | ||||||||||| || || | ||||| ||| | || |||| ||||||| ||| |
Sbjct 587 CGTTTAATCTTCGCCGGTAAGCAATTGGAAGACGGACGTAC-CTTGTCCGATTACAACAT 529
Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139
|||||| ||||| || || || | || ||| | |||
Sbjct 528 CCAAAAGGAATCTACTCTTCACTTGGTATTGCGTCTC 492
Score = 134 bits (148), Expect = 3e-26
Identities = 154/207 (74%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| |||||| | || |||||||| ||||| | ||||| || || ||
Sbjct 935 CAGATTTTCGTCAAAACTTTGACGGGAAAAACCATCACTTTGGAGGTTGAGCCTTCCGAT 876
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| ||||| |||||| || ||||| || || ||||||||||| || || || |||
Sbjct 875 ACCATTGAGAATGTCAAAGCTAAAATTCAAGATAAGGAAGGAATCCCCCCAGATCAACAA 816
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | || ||||| || |||||| | || |||||| | || || |||| ||||| |
Sbjct 815 CGTTTGATTTTCGCTGGCAAACAGTTGGAGGATGGACGCACACTGTCCGACTATAATATT 756
Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130
||||| ||||| || || ||| | |||
Sbjct 755 CAAAAGGAATCCACTCTACATTTAGTT 729
Score = 102 bits (112), Expect = 2e-16
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || || ||||| || ||||| ||||| | || || || |||||
Sbjct 479 CAAATCTTCGTAAAGACCCTCACCGGCAAAACCATCACTTTGGAAGTTGAGCCTTCAGAT 420
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| |||||||| || ||||| || || || || || || ||||| || || |||
Sbjct 419 ACCATTGAGAACGTAAAGGCCAAGATCCAAGATAAGGAGGGTATTCCTCCAGATCAACAA 360
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||||||||| || || | || || ||| | || | |||| || ||| ||
Sbjct 359 CGTTTGATCTTCGCCGGTAAGCAATTGGAGGACGGACGCACATTGTCCGACTACAACATC 300
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139
|| || || || || || || | || ||| | |||
Sbjct 299 CAGAAGGAGTCTACTCTTCACTTGGTATTGCGTCTC 264
>seq609
Length=128410
Score = 136 bits (150), Expect = 1e-26
Identities = 164/220 (75%), Gaps = 5/220 (2%)
Strand=Plus/Plus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| | |||||||| ||||| | || || || || |||||| | ||||| ||
Sbjct 92741 AAAATGC---AGATTTTCGTCAAAACCTTAACTGGTAAGACCATCACCTTAGAGGTCGAG 92797
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
|| ||||||||||| || |||||| || || || |||||||| || ||||| ||
Sbjct 92798 CCTTCTGACACCATCGAAAATGTCAAAGCTAAAATCCAAGACAAAGAGGGTATCCCCCCA 92857
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGA 178093
|| || || || | ||||||||||||||||| | |||||||| | || |||| ||||
Sbjct 92858 GATCAACAGCGTTTGATCTTCGCCGGAAAACAATTGGAAGATGGTCGTAC-CTTGTCCGA 92916
Query 178094 TTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTG 178133
|| ||| ||||||| || ||||| || ||| | ||| ||
Sbjct 92917 CTACAACATCCAAAAGGAGTCAACCCTCCATTTGGTTCTG 92956
>seq1128
Length=88325
Score = 129 bits (142), Expect = 1e-24
Identities = 149/201 (74%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| |||||||| |||||||| || ||||| |||||| | || || || || ||
Sbjct 114 CAAATCTTCGTGAAGACTCTCACCGGCAAAACAATCACCTTGGAAGTTGAGCCTTCGGAT 173
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| ||||| |||||| || || || || || || |||||||| || || || |||
Sbjct 174 ACCATTGAGAATGTCAAAGCCAAAATCCAAGATAAGGAGGGAATCCCACCAGATCAACAA 233
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||||||||| || || || || |||||| | ||| | |||| || || |
Sbjct 234 CGTTTGATCTTCGCCGGCAAGCAACTTGAGGATGGACGTACTTTGTCCGACTACAATATA 293
Query 178104 CAAAAAGAATCAACACTGCAT 178124
|| || ||||| ||||| |||
Sbjct 294 CAGAAGGAATCGACACTCCAT 314
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203238287120240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |