Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baetis_20rhodani_20[genbank_20GCA_5F001676355.1_202016-06-24] 381,865 sequences; 174,117,300 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq6449 84.2 2e-11 >seq6449 Length=203 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 17246 ATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAG 17305 ||||| || ||||||||||| ||||| ||||| || ||||| ||||| || || || || Sbjct 160 ATGAGGAGACTGTACATTTCAGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAGAAA 101 Query 17306 CATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACG 17365 || | |||||| | | ||| |||||| | ||||| || | ||||| || ||||| Sbjct 100 CACCTGGCTTCGGTGACTTGCACTTCCTGGCTGAATCTCTCAACCAGATTCTCATTCACA 41 Query 17366 ATGCCGTCGCTCGCGGCGAAAAACGC 17391 || || || ||||| || || || Sbjct 40 ATTCCATCAGAGGCGGCAAAGAAGGC 15 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515075193118200