Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baetis_20rhodani_20[genbank_20GCA_5F001676355.1_202016-06-24] 381,865 sequences; 174,117,300 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq6450 91.5 1e-13 seq6449 91.5 1e-13 >seq6450 Length=203 Score = 91.5 bits (100), Expect = 1e-13 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531 || || || | ||| || | ||||||||| || ||||| ||||| || ||||| ||||| Sbjct 172 ATGTAAGTGTTAATGAGGAGACTGTACATCTCAGAGTGGATGTTTTCGATGGCGATCTGG 113 Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGG 16591 || |||||||| || | || || | | ||| |||||| | |||| ||| |||| Sbjct 112 AAGCCATAGAAACACCTGGCTTCGGTGACTTGCACTTCCTGGCTGAATCTTTCAACCAGA 53 Query 16592 TTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGC 16629 ||||||||||| || || ||| || ||||| || || Sbjct 52 TTCTCATTCACAATTCCATCAGAGGCGGCAAAGAAGGC 15 >seq6449 Length=203 Score = 91.5 bits (100), Expect = 1e-13 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531 || || || | ||| || | |||||||||||| ||||| ||||| || ||||| ||||| Sbjct 172 ATGTAAGTGTTAATGAGGAGACTGTACATTTCAGAGTGGATGTTTTCGATGGCGATCTGG 113 Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGG 16591 || |||||||| || | || || | | ||| |||||| | |||| || |||| Sbjct 112 AAGCCATAGAAACACCTGGCTTCGGTGACTTGCACTTCCTGGCTGAATCTCTCAACCAGA 53 Query 16592 TTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGC 16629 ||||||||||| || || ||| || ||||| || || Sbjct 52 TTCTCATTCACAATTCCATCAGAGGCGGCAAAGAAGGC 15 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 508973259251800