Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baetis_20rhodani_20[genbank_20GCA_5F001676355.1_202016-06-24] 381,865 sequences; 174,117,300 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq149171 114 2e-20 >seq149171 Length=352 Score = 114 bits (126), Expect = 2e-20 Identities = 228/336 (68%), Gaps = 9/336 (3%) Strand=Plus/Minus Query 145746 CTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAA 145805 ||| || || || | ||| || | |||||| || ||||| | ||||| || ||||| || Sbjct 333 CTCCAGCCCTGTAACGTGCGCAATCATGTAAGTAAGCAGTGCATAGCTAGCAATGTTAAA 274 Query 145806 GGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAG---CTCCCC 145862 |||||| ||||| ||||| || | || | ||||| | ||||||||| | || | | Sbjct 273 GGGCACGCCCAGGCCCATATCTGCAGATCTTTGGTATAACTGGCAGGACAAATACTTCTC 214 Query 145863 GCCCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTC 145922 | | || ||||| || || | |||||| || || || ||||| || ||| || Sbjct 213 CTCGGAGACATAGAATTGCACCATGCAGTGGCACGGAGGAAGTGCCATCTGGGACAGATC 154 Query 145923 CGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGT---TCCTCTTGATCTC 145979 || |||||||||||| ||| | | || | | | ||| | ||||| | | | Sbjct 153 TGCTGGGTTCCAGGCGCAGAGCATAATTCTGCGGTCGTTGGGATTTGTCCTCAGGGTTT- 95 Query 145980 CCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCAC 146039 | |||| | | ||||||| || || ||||| ||| ||| ||||| || ||| || Sbjct 94 --CGATCACTTGCTTGAGCTGATCAACACCCTGGCCCGTGTAGTCTGTGTTCATGTCAAC 37 Query 146040 GTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTA 146075 ||| ||| || ||||| | |||||| || ||||| Sbjct 36 GTATTTGGCTCCAAAGTGGCGCCACTGAAATCCGTA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587260179034600