Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baetis_20rhodani_20[genbank_20GCA_5F001676355.1_202016-06-24] 381,865 sequences; 174,117,300 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq149171 132 4e-26 >seq149171 Length=352 Score = 132 bits (146), Expect = 4e-26 Identities = 229/327 (70%), Gaps = 7/327 (2%) Strand=Plus/Plus Query 20236 TATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACATGAACACAAATTATTTT 20295 || |||||||| ||| | || |||||||| |||| ||||||||||||||| | || Sbjct 1 TACGGATTTCAGTGGCGCCACTTTGGAGCCAAATACGTTGACATGAACACAGACTACACG 60 Query 20296 GGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATTAAAACGAACCCAAACGAC 20355 || || || || ||||| | | | || || | | | || || || |||||| Sbjct 61 GGCCAGGGTGTTGATCAGCTCAAGCAAGTGATCGAAACCCTGAGGACAAATCCCAACGAC 120 Query 20356 AGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTTTAATGGCTTTGCCTCCA 20415 | |||||||| | |||||||||||| | |||| || | ||||| | ||||| Sbjct 121 CGCAGAATTATGCTCTGCGCCTGGAACCCAGCAGATCTGTCCCAGATGGCACTTCCTCCG 180 Query 20416 TGTCATATGCTATG--CCAATTTTACGT-TGCTA--ATAATGAATTGTCGTGTCAAATGT 20470 || || ||| ||| ||||| || || | | | | || | ||||| || || | | Sbjct 181 TGCCA-CTGC-ATGGTGCAATTCTATGTCTCCGAGGAGAAGTATTTGTCCTGCCAGTTAT 238 Query 20471 ATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGC 20530 | ||| |||| || |||||||| ||||| || || || || ||||| || ||||| |||| Sbjct 239 ACCAAAGATCTGCAGATATGGGCCTGGGCGTGCCCTTTAACATTGCTAGCTATGCACTGC 298 Query 20531 TTACGTATATGATTGCACATGTTACAG 20557 |||| || |||||||| || ||||||| Sbjct 299 TTACTTACATGATTGCGCACGTTACAG 325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397326205772425