Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baetis_20rhodani_20[genbank_20GCA_5F001676355.1_202016-06-24] 381,865 sequences; 174,117,300 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq347318 91.5 2e-13 seq194953 87.8 2e-12 >seq347318 Length=1073 Score = 91.5 bits (100), Expect = 2e-13 Identities = 282/434 (65%), Gaps = 12/434 (3%) Strand=Plus/Minus Query 66210 TTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATA 66269 |||||||| ||||| || | || | |||||||| || || |||| | ||| || | | Sbjct 1069 TTGTTTCCACCCTGGTCAACATAGCGGGCGGTGTTGTTGTAGACTCGGAGCATGGGCACA 1010 Query 66270 ATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAAT--ATTAC 66327 | ||||||||| | |||||||| || | || || | ||| ||||| || | | Sbjct 1009 AGGCCATTGGATATTCCATTGGTGCCAGCAATGTATGTGCCAGAGGCACGGATGCAATGG 950 Query 66328 TAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTAT 66387 ||||| || || || ||||| || ||||| | ||||| | || | || | Sbjct 949 ACATTGACG--CCAATGCCACCTGCAGACTTGGAGATGAGGGCGCACTGCTTCAGAGTGT 892 Query 66388 CATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTG-- 66445 | ||||||||||| || || |||||| ||||| | || || || || || || | ||| Sbjct 891 CGTAGATGCCCTCAATGCTGTCATCCTTCATGGTTAGCAGGAAGCAACTTGAGAGTTGAG 832 Query 66446 --GTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 66503 ||||| || | || || || | ||| || || || || || || | ||| Sbjct 831 GTTTGACG----GTGGCAGCGTTGAACAGGGTGGGGGAGGCATGAGTGAAATAGCGTTCC 776 Query 66504 GAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCG 66563 || || |||||||| || || | | || || ||| ||| || || || || Sbjct 775 GACAGCAGATTGTAGGTGATGATGGTGGCATCAATGTCCTCACCATGGATACCAACAGCA 716 Query 66564 ACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAG 66623 || | ||| | ||||||||| || | || | | || |||| || || |||||| Sbjct 715 ACTCTCATCAGCATGTGCTGCGGGCGCTCGGCCACTTTATTGTCAATGCGCAGCAAGTAT 656 Query 66624 GATTTTTCCAAAGT 66637 ||| ||||| ||| Sbjct 655 GATCGTTCCAGAGT 642 >seq194953 Length=429 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 36180 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 36239 |||| ||||| ||| | |||||| || ||||| |||||||| | || | ||| | Sbjct 139 CCTCATCTCTGGAAATAAGCTCGTTGCTGAAGGTGAGACCGGGCATCAAACCTCTCTTCT 80 Query 36240 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 36299 | ||||| || ||||||||||| || || || ||||| ||||| ||||| ||||||| Sbjct 79 TCAGCCAGAAAATGGACGCAAAGCTGCCTGAGAAAAAAATCCCTTCGACTGCTGCAAAGG 20 Query 36300 CAATAAGTCTCTCTCC 36315 ||| | |||||| || Sbjct 19 CAACCACTCTCTCGCC 4 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655031135546600