Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baetis_20rhodani_20[genbank_20GCA_5F001676355.1_202016-06-24] 381,865 sequences; 174,117,300 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq149171 93.3 4e-14 >seq149171 Length=352 Score = 93.3 bits (102), Expect = 4e-14 Identities = 140/196 (71%), Gaps = 5/196 (3%) Strand=Plus/Minus Query 20990 CAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGG 21049 ||| || || ||||| || |||| || || || || || ||||| || |||||||| || Sbjct 330 CAGCCCTGTAACGTGCGCAATCATGTAAGTAAGCAGTGCATAGCTAGCAATGTTAAAGGG 271 Query 21050 GACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACA---GCTCCCCCCG 21106 || || |||||||| || || || || ||||| | ||||||||||| || | || Sbjct 270 CACGCCCAGGCCCATATCTGCAGATCTTTGGTATAACTGGCAGGACAAATACTTCTCCTC 211 Query 21107 AGCCACGTAAAACTGACACAAAAC-GTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCG 21165 | || || || || ||| | | ||| || ||||| || |||||| | | || || | Sbjct 210 GGAGACATAGAATTG-CACCATGCAGTGGCACGGAGGAAGTGCCATCTGGGACAGATCTG 152 Query 21166 CGGGGTTCCACGCGCA 21181 | |||||||| ||||| Sbjct 151 CTGGGTTCCAGGCGCA 136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425785139185200