Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baetis_20rhodani_20[genbank_20GCA_5F001676355.1_202016-06-24] 381,865 sequences; 174,117,300 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq347318 95.1 2e-14 seq194953 93.3 6e-14 >seq347318 Length=1073 Score = 95.1 bits (104), Expect = 2e-14 Identities = 283/434 (65%), Gaps = 12/434 (3%) Strand=Plus/Minus Query 80089 TTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATA 80148 |||||||| ||||| || | || | |||||||| || || |||| | ||| || | | Sbjct 1069 TTGTTTCCACCCTGGTCAACATAGCGGGCGGTGTTGTTGTAGACTCGGAGCATGGGCACA 1010 Query 80149 ATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTAC 80206 | ||||||||| | |||||||| || | || || | ||| |||||| || | | Sbjct 1009 AGGCCATTGGATATTCCATTGGTGCCAGCAATGTATGTGCCAGAGGCACGGATGCAATGG 950 Query 80207 TAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTAT 80266 ||||| || || || ||||| || ||||| | ||||| | || | || | Sbjct 949 ACATTGACG--CCAATGCCACCTGCAGACTTGGAGATGAGGGCGCACTGCTTCAGAGTGT 892 Query 80267 CATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTG-- 80324 | ||||||||||| ||||| ||||| ||||| | || || || || || || | ||| Sbjct 891 CGTAGATGCCCTCAATGCTGTCATCCTTCATGGTTAGCAGGAAGCAACTTGAGAGTTGAG 832 Query 80325 --GTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 80382 ||||| || | || || || | ||| || || || || || || | ||| Sbjct 831 GTTTGACG----GTGGCAGCGTTGAACAGGGTGGGGGAGGCATGAGTGAAATAGCGTTCC 776 Query 80383 GACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCG 80442 ||||| |||||||| || || | | || || ||| ||| || || || || Sbjct 775 GACAGCAGATTGTAGGTGATGATGGTGGCATCAATGTCCTCACCATGGATACCAACAGCA 716 Query 80443 ACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAA 80502 || | ||| | ||||||||| || | || | | || || | || || |||||| Sbjct 715 ACTCTCATCAGCATGTGCTGCGGGCGCTCGGCCACTTTATTGTCAATGCGCAGCAAGTAT 656 Query 80503 GATTTTTCCAAAGT 80516 ||| ||||| ||| Sbjct 655 GATCGTTCCAGAGT 642 >seq194953 Length=429 Score = 93.3 bits (102), Expect = 6e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041 |||| ||||| ||| || |||||| || ||||| |||||||| | || | ||| | Sbjct 139 CCTCATCTCTGGAAATAAGCTCGTTGCTGAAGGTGAGACCGGGCATCAAACCTCTCTTCT 80 Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101 | ||||| || ||||||||||| || || || || || ||||| ||||| ||||||| Sbjct 79 TCAGCCAGAAAATGGACGCAAAGCTGCCTGAGAAAAAAATCCCTTCGACTGCTGCAAAGG 20 Query 50102 CAACAAGTCTCTCTCC 50117 |||| | |||||| || Sbjct 19 CAACCACTCTCTCGCC 4 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 714840278558600