Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Baetis_20rhodani_20[genbank_20GCA_5F001676355.1_202016-06-24]
381,865 sequences; 174,117,300 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq41981 98.7 1e-15
seq315868 96.9 3e-15
>seq41981
Length=230
Score = 98.7 bits (108), Expect = 1e-15
Identities = 138/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 142991 GATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCA 143050
||||| || || |||||||| ||| || |||| ||||| || || || || |||
Sbjct 229 GATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCA 170
Query 143051 TAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGC 143110
| || ||||| ||||| |||||||| |||||||||||||| || || || |
Sbjct 169 AAAATGAGACGCTGCTGGTCGGGAGGGATGCCTTCTTTGTCCTGGATCTTAGCCTTAACA 110
Query 143111 TGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTT 143170
| || | ||||| | ||| || || || | ||| | |||||||||||||| || ||
Sbjct 109 TTCTCAATAGTGTCGGAGGGCTCAACCTCCAAAGTGATGGTCTTGCCGGTCAAAGTCTTC 50
Query 143171 ACGAATATTTGCAT 143184
|| || ||||||||
Sbjct 49 ACAAAAATTTGCAT 36
>seq315868
Length=823
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| || || | ||||| || || || | || ||||| || || |||||||| ||
Sbjct 58 CCACCGCGCAGACGCAGGACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCCGAA 117
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || | ||| || || || ||||||||| |||||| || ||||||||||||||
Sbjct 118 AGGGTACGGCCGTCCTCAAGCTGCTTACCAGCAAAGATCAAGCGCTGCTGATCGGGAGGG 177
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||| ||||| |||||| ||| | | || | ||||||| ||| || ||
Sbjct 178 ATACCTTCCTTGTCCTGAATTTTGGCTTTCACGTTCTCAATTGTGTCCGAGGGCTCGACC 237
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATAGCT 143188
|| | || | || ||||| |||| || || ||||| || |||||| ||
Sbjct 238 TCCAGGGTGATGGTTTTGCCAGTCAGAGTCTTAACGAAGATCTGCATACCT 288
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 504594261826800
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |