Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baetis_20rhodani_20[genbank_20GCA_5F001676355.1_202016-06-24] 381,865 sequences; 174,117,300 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq149171 138 2e-27 >seq149171 Length=352 Score = 138 bits (152), Expect = 2e-27 Identities = 229/330 (69%), Gaps = 3/330 (1%) Strand=Plus/Plus Query 70085 TACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTAGACTGCGAGACAGACTATTCG 70144 |||||||| |||||| | |||| || |||| || || ||| | |||||||| || Sbjct 1 TACGGATTTCAGTGGCGCCACTTTGGAGCCAAATACGTTGACATGAACACAGACTACACG 60 Query 70145 GGTCAGGGTGTTGATCAATTGCAGACAATCATTGACACTCTCAAGACCAATCCAACAGAT 70204 || |||||||||||||| | || | | || || || || | ||| ||||| | || Sbjct 61 GGCCAGGGTGTTGATCAGCTCAAGCAAGTGATCGAAACCCTGAGGACAAATCCCAACGAC 120 Query 70205 AGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGGCACTACCACCG 70264 | || || | | ||| | ||||| || |||||| || ||| |||||||| || ||| Sbjct 121 CGCAGAATTATGCTCTGCGCCTGGAACCCAGCAGATCTGTCCCAGATGGCACTTCCTCCG 180 Query 70265 TGTCACTGTTTGGCTCAGTTTTA---CTCGTACGATGGCAAATTGTCATGCTTAATGTAT 70321 || ||||| ||| || || || ||| | || | ||||| ||| | || Sbjct 181 TGCCACTGCATGGTGCAATTCTATGTCTCCGAGGAGAAGTATTTGTCCTGCCAGTTATAC 240 Query 70322 CAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTATTCTATGTTG 70381 || || ||| || |||||||| || || |||||||||||||| |||||| | || | Sbjct 241 CAAAGATCTGCAGATATGGGCCTGGGCGTGCCCTTTAACATTGCTAGCTATGCACTGCTT 300 Query 70382 ACGCACATGATTGCTCACATTACCGGCCTG 70411 || |||||||||| ||| |||| || ||| Sbjct 301 ACTTACATGATTGCGCACGTTACAGGGCTG 330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 737521892857400