Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baetis_20rhodani_20[genbank_20GCA_5F001676355.1_202016-06-24] 381,865 sequences; 174,117,300 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq315868 82.4 6e-11 >seq315868 Length=823 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| || |||| | | ||| || ||||| ||| |||||| ||||||||||| || | Sbjct 513 ACCACCACGCAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGA 572 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 || || | || |||| |||||| || || |||| | |||||||||||| || Sbjct 573 CAGAGTACGACCATCTTCCAACTGCTTGCCAGCGAAAATCAGACGCTGCTGATCGGGAGG 632 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678 | | ||||||||| ||| || ||||| | | ||||| || | || ||| Sbjct 633 GATGCCCTCCTTGTCCTGAATCTTAGCCTTGACATTTTCAATGGTGTCAGAAGGCTCGAC 692 Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||| | || || || || || || ||||| || || || |||||||| Sbjct 693 CTCCAAAGTGATAGTCTTTCCAGTCAGAGTCTTAACGAAGATCTGCAT 740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419290705471865