Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baetis_20rhodani_20[genbank_20GCA_5F001676355.1_202016-06-24] 381,865 sequences; 174,117,300 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq254839 96.9 2e-15 seq225558 93.3 2e-14 seq102366 87.8 9e-13 seq98841 87.8 9e-13 >seq254839 Length=571 Score = 96.9 bits (106), Expect = 2e-15 Identities = 57/60 (95%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 11471 TCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1 TCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCCG 60 >seq225558 Length=269 Score = 93.3 bits (102), Expect = 2e-14 Identities = 55/58 (95%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 11472 CGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1 CGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 58 >seq102366 Length=289 Score = 87.8 bits (96), Expect = 9e-13 Identities = 49/50 (98%), Gaps = 0/50 (0%) Strand=Plus/Plus Query 11480 CGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 5 CGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 54 >seq98841 Length=285 Score = 87.8 bits (96), Expect = 9e-13 Identities = 49/50 (98%), Gaps = 0/50 (0%) Strand=Plus/Plus Query 11480 CGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 5 CGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 54 Lambda K H 0.641 0.411 0.925 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 260274225266740