Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baetis_20rhodani_20[genbank_20GCA_5F001676355.1_202016-06-24] 381,865 sequences; 174,117,300 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq41981 93.3 4e-14 seq315868 86.0 5e-12 >seq41981 Length=230 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || || || || || || | || || | || || ||| || | Sbjct 36 ATGCAAATTTTTGTGAAGACTTTGACCGGCAAGACCATCACTTTGGAGGTTGAGCCCTCC 95 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || ||| | || || ||||| |||||||||||||| |||||||| || Sbjct 96 GACACTATTGAGAATGTTAAGGCTAAGATCCAGGACAAAGAAGGCATCCCTCCCGACCAG 155 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | || |||| | ||||||||| || ||||||| | | | | | ||| || ||| Sbjct 156 CAGCGTCTCATTTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAAC 215 Query 24171 ATTCAAAAAGAATC 24184 || || || ||||| Sbjct 216 ATCCAGAAGGAATC 229 >seq315868 Length=823 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | |||||||| | || || | || |||||| | Sbjct 740 ATGCAGATCTTCGTTAAGACTCTGACTGGAAAGACTATCACTTTGGAGGTCGAGCCTTCT 681 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | ||||| |||||| ||||| || ||||| ||||||||||| Sbjct 680 GACACCATTGAAAATGTCAAGGCTAAGATTCAGGACAAGGAGGGCATCCCTCCCGATCAG 621 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | ||||||| || |||||||| | ||||||| | | | ||| || ||| Sbjct 620 CAGCGTCTGATTTTCGCTGGCAAGCAGTTGGAAGATGGTCGTACTCTGTCCGACTACAAC 561 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTG 24200 ||||| || || || || |||| || ||| Sbjct 560 ATTCAGAAGGAGTCCACCCTTCACTTGGTG 531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427935086589075