Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baetis_20rhodani_20[genbank_20GCA_5F001676355.1_202016-06-24] 381,865 sequences; 174,117,300 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq149171 96.9 3e-15 >seq149171 Length=352 Score = 96.9 bits (106), Expect = 3e-15 Identities = 219/329 (67%), Gaps = 3/329 (1%) Strand=Plus/Minus Query 20237 AGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGA 20296 || || ||||| || |||| ||| ||||| | || | |||||| ||||||||||| || Sbjct 329 AGCCCTGTAACGTGCGCAATCATGTAAGTAAGCAGTGCATAGCTAGCAATGTTAAAGGGC 270 Query 20297 ACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGG---AAAGCTCACCGTCA 20353 || |||| ||||| ||| | || || || || | ||| |||| || || | || Sbjct 269 ACGCCCAGGCCCATATCTGCAGATCTTTGGTATAACTGGCAGGACAAATACTTCTCCTCG 210 Query 20354 GCTACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCC 20413 | ||||| ||||| | |||| || || ||||| |||||| |||| || || Sbjct 209 GAGACATAGAATTGCACCATGCAGTGGCACGGAGGAAGTGCCATCTGGGACAGATCTGCT 150 Query 20414 GGGTTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACA 20473 |||||||| || || | || ||||| | |||| ||||| | | | || | Sbjct 149 GGGTTCCAGGCGCAGAGCATAATTCTGCGGTCGTTGGGATTTGTCCTCAGGGTTTCGATC 90 Query 20474 ATGTACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCC 20533 | | | | || |||| |||||||| || ||||| | | | ||| ||||| Sbjct 89 ACTTGCTTGAGCTGATCAACACCCTGGCCCGTGTAGTCTGTGTTCATGTCAACGTATTTG 30 Query 20534 GCCCCAAAGTGCCTCCACTGGAAACCGTA 20562 || |||||||| | |||||| || ||||| Sbjct 29 GCTCCAAAGTGGCGCCACTGAAATCCGTA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 439265989696600