Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baetis_20rhodani_20[genbank_20GCA_5F001676355.1_202016-06-24] 381,865 sequences; 174,117,300 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq365856 96.9 3e-15 seq158334 93.3 3e-14 seq131931 89.7 4e-13 seq282986 87.8 1e-12 >seq365856 Length=1362 Score = 96.9 bits (106), Expect = 3e-15 Identities = 131/180 (73%), Gaps = 6/180 (3%) Strand=Plus/Plus Query 108465 GTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACAA 108524 |||||||| || |||||||| || ||||| ||| || ||| |||||||||| ||||| Sbjct 844 GTGGGTGCGAGACCACAGGGTGCATCACAAATACAGCGAGACGCCGGCCGACCCGCACAA 903 Query 108525 CGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCCGA 108584 ||||||| | || | | ||||||||| |||| ||||| |||| || ||| | ||||| Sbjct 904 CGCCAACCGCGGTCTATTTTTCTCGCACATGGGCTGGCTGATGAAGAAGAAGCA-CCCGA 962 Query 108585 CGTGATCTCGGC---CGGTCGAAAAATGGACATGACGGACATATACTCCGATCCGGTGGT 108641 || || ||| || |||||| |||||| | ||| | | ||| |||||||| Sbjct 963 GCTG--CTTGGCGAAAGGCAAAAAAATCGACATGTCAGACGTCGAGAGCGACCCGGTGGT 1020 >seq158334 Length=366 Score = 93.3 bits (102), Expect = 3e-14 Identities = 63/71 (89%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 108887 TCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCGCCGAGT 108946 |||||||||| |||||||||||||||||||| ||||| | ||||||||||| ||||||| Sbjct 152 TCGGCGAGGGCTGGCACAACTACCACCACGTCTTCCCGTGGGACTACAAGGCGGCCGAGT 211 Query 108947 TGGGGAACGAC 108957 |||| ||| || Sbjct 212 TGGGCAACTAC 222 >seq131931 Length=326 Score = 89.7 bits (98), Expect = 4e-13 Identities = 98/128 (77%), Gaps = 2/128 (2%) Strand=Plus/Plus Query 108464 AGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACAC-GACGGCCGACCCACAC 108522 ||||||||| ||| ||| | || |||||||||||| || || ||| || ||||| ||| Sbjct 15 AGTGGGTGCGCGACCACCGCGTGCACCACAAGTACAGCGAAACTGAC-GCAGACCCTCAC 73 Query 108523 AACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCC 108582 ||||||||| | || |||| || | ||||| |||||| | |||||| ||| |||| Sbjct 74 AACGCCAACCGCGGCTTCTTTTTTGCCCACGTTGGATGGTTGATGATGCGCAAACACCCT 133 Query 108583 GACGTGAT 108590 ||||| || Sbjct 134 GACGTCAT 141 >seq282986 Length=451 Score = 87.8 bits (96), Expect = 1e-12 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 108868 TTGGTGGCGGCGTTGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTAC 108927 |||||| || |||||| || |||||||| |||||||||||||||||||| ||||| | Sbjct 134 TTGGTGTCGATGTTGGCGCTGGGCGAGGGCTGGCACAACTACCACCACGTCTTCCCGTGG 193 Query 108928 GACTACAAGGCCGCCGAGTTGGG 108950 ||||||||| | ||||| |||| Sbjct 194 GACTACAAGACGTCCGAGCTGGG 216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379996037143560