Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baetis_20rhodani_20[genbank_20GCA_5F001676355.1_202016-06-24] 381,865 sequences; 174,117,300 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq298802 89.7 6e-13 seq303592 86.0 8e-12 >seq298802 Length=733 Score = 89.7 bits (98), Expect = 6e-13 Identities = 78/97 (80%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 |||||||||| ||||||||||||| || ||| ||||| || | ||| || || |||||| Sbjct 430 TAGATGTTGGAGGTGTATGGCTCAATGCTCTCGTTGTTGCCGAGGATCTGAGCAGTGGAG 489 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGA 115999 || || |||||||| |||| || ||| |||||||| Sbjct 490 GCGGTTGGCATGGGAGCCACCAGCAGGGAGTTGCGGA 526 >seq303592 Length=754 Score = 86.0 bits (94), Expect = 8e-12 Identities = 77/97 (79%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 |||||||||| ||||||||||||| || ||| ||||| || | ||| || || |||||| Sbjct 312 TAGATGTTGGAGGTGTATGGCTCAATGCTCTCGTTGTTGCCGAGGATCTGAGCAGTGGAG 253 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGA 115999 || || |||||||| || | || ||| |||||||| Sbjct 252 GCAGTTGGCATGGGAGCAACCAGCAGGGAGTTGCGGA 216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610578738413400