Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baetis_20rhodani_20[genbank_20GCA_5F001676355.1_202016-06-24] 381,865 sequences; 174,117,300 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq303592 116 6e-21 seq298802 116 6e-21 seq149171 84.2 3e-11 >seq303592 Length=754 Score = 116 bits (128), Expect = 6e-21 Identities = 137/183 (75%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 204148 CCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGAAAGTCTCC 204207 ||||| |||| | | |||| || | | |||||| |||||| | || || ||||| Sbjct 391 CCACAGGCCCTGCTCGGTCAGGTCTCTGAGCAGGTGATGGTTGACAACTTGGAATTCTCC 332 Query 204208 GGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGC-CTCGTTGTTGC 204266 || ||||| | |||||| | | |||| |||| |||| || || || ||||||||||| Sbjct 331 AGAAAGCACACGGCGGGTGTAGATGTTGGAGGTGTATGGCTC-AATGCTCTCGTTGTTGC 273 Query 204267 CGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTGCGCACAC 204326 ||| |||||||| ||| ||| || ||||||||||| | |||||||||||||| || | Sbjct 272 CGAGGATCTGAGCAGTGGAGGCAGTTGGCATGGGAGCAACCAGCAGGGAGTTGCGGACGC 213 Query 204327 CGT 204329 ||| Sbjct 212 CGT 210 >seq298802 Length=733 Score = 116 bits (128), Expect = 6e-21 Identities = 127/166 (77%), Gaps = 2/166 (1%) Strand=Plus/Plus Query 204165 TCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGG 204224 |||| || | | |||||| |||||| | || || ||||| || ||||| | |||| Sbjct 368 TCAGGTCTCTGAGCAGGTGATGGTTGACAACTTGGAATTCTCCAGAGAGCACACGGCGGG 427 Query 204225 TGAACAGGTTGTTGGTGAATGGTTCGAACGC-CTCGTTGTTGCCGAAAATCTGAGCGGTG 204283 || | | |||| |||| |||| || || || |||||||||||||| |||||||| ||| Sbjct 428 TGTAGATGTTGGAGGTGTATGGCTC-AATGCTCTCGTTGTTGCCGAGGATCTGAGCAGTG 486 Query 204284 CTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTGCGCACACCGT 204329 ||| || ||||||||||||| |||||||||||||| || |||| Sbjct 487 GAGGCGGTTGGCATGGGAGCCACCAGCAGGGAGTTGCGGACGCCGT 532 >seq149171 Length=352 Score = 84.2 bits (92), Expect = 3e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 116090 TTTATCGTGTCTGTTTTACCAAAGATCTGCAGACATGGGGTTGGGCGTACCCTTTAACGT 116149 ||| || || | ||| ||||||||||||||||| ||||| ||||||| ||||||||| | Sbjct 222 TTTGTCCTGCCAGTTATACCAAAGATCTGCAGATATGGGCCTGGGCGTGCCCTTTAACAT 281 Query 116150 TGCGAGCTACGCGCTACTGACTCATATTATGGCACA 116185 ||| ||||| || || || ||| | || || || || Sbjct 282 TGCTAGCTATGCACTGCTTACTTACATGATTGCGCA 317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 791359675744400