Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baetis_20rhodani_20[genbank_20GCA_5F001676355.1_202016-06-24] 381,865 sequences; 174,117,300 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq381734 105 3e-17 seq380081 89.7 2e-12 >seq381734 Length=9470 Score = 105 bits (116), Expect = 3e-17 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || ||||| |||||||||||||| || || || || ||||| || || |||| Sbjct 233 AATGCAGATCTTCGTGAAAACACTGACTGGCAAGACCATCACCCTTGAGGTGGAGCCATC 174 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||| | || || | | || ||||||||||| |||||||| ||||||||||| || Sbjct 173 TGACACAATCGAGAATGTCAAGGCGAAAATTCAAGACAAGGAAGGTATTCCTCCTGACCA 114 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 || | || || ||| | || || || || |||||||| | || || | || || || Sbjct 113 GCAGAGATTGATCTTCGCTGGCAAGCAGCTGGAAGATGGTCGCACCCTGTCTGACTACAA 54 Query 391229 TATTGATAAGG 391239 ||| | |||| Sbjct 53 TATCCAGAAGG 43 >seq380081 Length=3541 Score = 89.7 bits (98), Expect = 2e-12 Identities = 196/291 (67%), Gaps = 6/291 (2%) Strand=Plus/Minus Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 |||||| | || || | ||||| || || || ||||| || || || || || || ||| Sbjct 1996 GTTACTCACGCTGTTGTGACTGTGCCTGCCTACTTCAACGACGCCCAGCGTCAGGCTACT 1937 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 || ||||| ||| || ||||| | | || | |||| || || || || || || Sbjct 1936 AAGGATGCTGGAACCATCGCTGGCCTCCAGGTCATGAGAATCATCAACGAGCCCACCGCC 1877 Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTA 451492 || || | || ||||| || ||| || ||| || | ||| || || | | || Sbjct 1876 GCCGCCATTGCTTATGGTCT-GGACAAG---AAGGAA--GGAGAGAAGAACGTGCTTGTG 1823 Query 451493 TTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTT 451552 |||||||| ||||| || || ||| ||| | || | || || |||| || ||| Sbjct 1822 TTTGATTTGGGTGGCGGCACCTTTGACGTGTCTCTGCTGACCATCGACAATGGCGTTTTT 1763 Query 451553 GAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGAT 451603 || || ||| ||||||||||| ||||| | ||||| |||||| | ||| Sbjct 1762 GAGGTGGTGGCCACCAATGGTGACACTCACTTGGGAGGAGAAGATTTCGAT 1712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1966051910631420