Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baetis_20rhodani_20[genbank_20GCA_5F001676355.1_202016-06-24] 381,865 sequences; 174,117,300 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq54371 98.7 1e-15 >seq54371 Length=241 Score = 98.7 bits (108), Expect = 1e-15 Identities = 162/232 (70%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 47843 CCTCGACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATA 47902 |||| ||||||||| ||||||||||||| || | | |||||||||||| || | | Sbjct 1 CCTCAACATAATCTTTGGCATGTCCCCAATCTCTTTTGGAATCAAGATTTCCAAGCTCAA 60 Query 47903 AACAGTCTTGCTTACCTTCAGAGATTGCTTTTAAT--GCTCTTGTAATCTTACGAGTTAC 47960 | || | ||| |||||| ||| | | || || ||||| | || || Sbjct 61 GGAATTCCATTTGACCAAGAGAGAT--CTTGGCAACAGATCGGGTGATCTTTCTCGTCAC 118 Query 47961 AAAAGTTTCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACAT 48020 |||| |||| || ||||| || |||||| || || || || ||| | |||||| |||| Sbjct 119 AAAATTTTCTCCTCGTCTCGGGCTTTCATGGTTGAACAGGATTCCATTGCAGGCAAACAT 178 Query 48021 TCCGTATGATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCA 48072 |||| | ||| | |||||| ||||||||||| |||||||| || ||| Sbjct 179 GTCGTAGGCTTCTCTGTAGTTCACAACTATCCAGTAGCCATAGAGCTTGGCA 230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 662317787261800