Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baetis_20rhodani_20[genbank_20GCA_5F001676355.1_202016-06-24] 381,865 sequences; 174,117,300 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq41981 86.0 1e-11 >seq41981 Length=230 Score = 86.0 bits (94), Expect = 1e-11 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238 || || |||||||| | || | ||| || | || || ||||||||||| | | | Sbjct 217 ATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAAATGAGACGC 158 Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298 || || || ||||| || |||||||| || || || || | || | ||| |||||| Sbjct 157 TGCTGGTCGGGAGGGATGCCTTCTTTGTCCTGGATCTTAGCCTTAACATTCTCAATAGTG 98 Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358 ||||| | |||||| || | ||| || || || || || | || || ||||| |||||| Sbjct 97 TCGGAGGGCTCAACCTCCAAAGTGATGGTCTTGCCGGTCAAAGTCTTCACAAAAATTTGC 38 Query 193359 AT 193360 || Sbjct 37 AT 36 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 895360068406800