Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baetis_20rhodani_20[genbank_20GCA_5F001676355.1_202016-06-24] 381,865 sequences; 174,117,300 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq149171 127 2e-24 >seq149171 Length=352 Score = 127 bits (140), Expect = 2e-24 Identities = 226/329 (69%), Gaps = 3/329 (1%) Strand=Plus/Minus Query 146986 AGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGG 147045 || || || ||||| || | |||||| || ||||| | ||||| || ||||| ||||| Sbjct 329 AGCCCTGTAACGTGCGCAATCATGTAAGTAAGCAGTGCATAGCTAGCAATGTTAAAGGGC 270 Query 147046 ACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGA---GCTCCCCGTCG 147102 || ||||||||||| || | || || ||||| | |||||| || | || | | ||| Sbjct 269 ACGCCCAGGCCCATATCTGCAGATCTTTGGTATAACTGGCAGGACAAATACTTCTCCTCG 210 Query 147103 GCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCG 147162 | || || || || || | ||||||||| || || ||||| || ||| || || Sbjct 209 GAGACATAGAATTGCACCATGCAGTGGCACGGAGGAAGTGCCATCTGGGACAGATCTGCT 150 Query 147163 GGGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATA 147222 ||||||||||| ||| || | | | | | ||| || || | | |||||| Sbjct 149 GGGTTCCAGGCGCAGAGCATAATTCTGCGGTCGTTGGGATTTGTCCTCAGGGTTTCGATC 90 Query 147223 ACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTG 147282 || | | ||||| || || ||||||||| ||||| ||| ||| ||||| || Sbjct 89 ACTTGCTTGAGCTGATCAACACCCTGGCCCGTGTAGTCTGTGTTCATGTCAACGTATTTG 30 Query 147283 GCCCCAAAGTGCCTCCACTGGAAGCCGTA 147311 || |||||||| | |||||| || ||||| Sbjct 29 GCTCCAAAGTGGCGCCACTGAAATCCGTA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 580702829436000