Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baetis_20rhodani_20[genbank_20GCA_5F001676355.1_202016-06-24] 381,865 sequences; 174,117,300 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq149171 123 2e-23 >seq149171 Length=352 Score = 123 bits (136), Expect = 2e-23 Identities = 228/333 (68%), Gaps = 5/333 (2%) Strand=Plus/Minus Query 29939 TCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAG 29998 || ||||| || ||||| || |||||||| || || || | ||||| || ||||||||| Sbjct 332 TCCAGCCCTGTAACGTGCGCAATCATGTAAGTAAGCAGTGCATAGCTAGCAATGTTAAAG 273 Query 29999 GGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACG----AGAGCTCTCC 30054 || || || || ||||| || | || || ||||| | ||| || | | | ||||| Sbjct 272 GGCACGCCCAGGCCCATATCTGCAGATCTTTGGTATAACTGGCAGGACAAATACTTCTCC 213 Query 30055 GTCGCTCACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTC 30114 ||| || || || || |||| ||||||||||||||| ||||| || || || Sbjct 212 -TCGGAGACATAGAATTGCACCATGCAGTGGCACGGAGGAAGTGCCATCTGGGACAGATC 154 Query 30115 TTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTC 30174 | |||||||||||||| | || || | | ||| | || || |||| | | || Sbjct 153 TGCTGGGTTCCAGGCGCAGAGCATAATTCTGCGGTCGTTGGGATTTGTCCTCAGGGTTTC 94 Query 30175 CACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTA 30234 | | | | |||||||| || ||| |||| |||||||| ||||||| ||| Sbjct 93 GATCACTTGCTTGAGCTGATCAACACCCTGGCCCGTGTAGTCTGTGTTCATGTCAACGTA 34 Query 30235 CTCTGCTCCGAAATGCCTCCACTGGAACCCGTA 30267 | ||||| || || | |||||| || ||||| Sbjct 33 TTTGGCTCCAAAGTGGCGCCACTGAAATCCGTA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404419439651580