Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baetis_20rhodani_20[genbank_20GCA_5F001676355.1_202016-06-24] 381,865 sequences; 174,117,300 total letters Query= NC_028904.1 Length=49452 Score E Sequences producing significant alignments: (Bits) Value seq175766 95.1 4e-15 seq258148 93.3 1e-14 >seq175766 Length=392 Score = 95.1 bits (104), Expect = 4e-15 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 23563 GAACGGCTGGTCCGGCATCGGCTACAACTTCGTGGTCGACCAGGACGGCAACATCTACGA 23622 |||||||||||||| ||| |||||||||||| |||||| | ||||||||||||||||| Sbjct 151 GAACGGCTGGTCCGACATTGGCTACAACTTCCTGGTCGGCGGTGACGGCAACATCTACGA 92 Query 23623 GGGCCGTGGCTGGGA 23637 ||| || |||||||| Sbjct 91 GGGTCGCGGCTGGGA 77 >seq258148 Length=502 Score = 93.3 bits (102), Expect = 1e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 23560 CGGGAACGGCTGGTCCGGCATCGGCTACAACTTCGTGGTCGACCAGGACGGCAACATCTA 23619 || |||||||||||| | ||| |||||||||||| |||| | | ||||||||||| | || Sbjct 200 CGTGAACGGCTGGTCGGACATTGGCTACAACTTCCTGGTGGGCGAGGACGGCAACGTGTA 259 Query 23620 CGAGGGCCGTGGCTGGGATCTCGTCGGGGCGCACTGCCCCAACCACAACACGTCCGGCAT 23679 ||||||| | || ||||| |||| |||||| |||| | ||||| | | |||| Sbjct 260 CGAGGGCAGGGGGTGGGAGGCGATCGGCGCGCACACCCCCGGCTTCAACAGCTTCAGCAT 319 Query 23680 CGGTGT 23685 ||| || Sbjct 320 CGGCGT 325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157407759869820