Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baetis_20rhodani_20[genbank_20GCA_5F001676355.1_202016-06-24] 381,865 sequences; 174,117,300 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq149171 132 4e-26 >seq149171 Length=352 Score = 132 bits (146), Expect = 4e-26 Identities = 224/321 (70%), Gaps = 5/321 (2%) Strand=Plus/Plus Query 34412 TACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAGCGAAG-CGGACTATTC 34470 ||||| || |||||| | |||||||| || | || || | ||| | ||||| | Sbjct 1 TACGGATTTCAGTGGCGCCACTTTGGAGCCAAATA-CGTTGACATGAACACAGACTACAC 59 Query 34471 GGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTTGAAGCGGAACCCTGATGA 34530 ||| ||||| | || ||||| || | |||||||| ||| ||| | || || | || Sbjct 60 GGGCCAGGGTGTTGATCAGCTCAAGCAAGTGATCGAAACCCTGAGGACAAATCCCAACGA 119 Query 34531 CAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCC 34590 | | || || || | ||||| |||||||| ||||| | | |||||| || || || Sbjct 120 CCGCAGAATTATGCTCTGCGCCTGGAACCCAGCAGATCTGTCCCAGATGGCACTTCCTCC 179 Query 34591 GTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGC---TGTCCTGCCAGCTCTA 34647 ||||||| | | |||||||| ||| | | | | || ||||||||||| | || Sbjct 180 GTGCCACTGCATGGTGCAATTCTATGTCTCCGAGGAGAAGTATTTGTCCTGCCAGTTATA 239 Query 34648 TCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCT 34707 ||| |||| | ||| ||||| | || ||||| || ||||||||||| || || ||||| Sbjct 240 CCAAAGATCTGCAGATATGGGCCTGGGCGTGCCCTTTAACATTGCTAGCTATGCACTGCT 299 Query 34708 CACGTACATGATCGCTCATGT 34728 || |||||||| || || || Sbjct 300 TACTTACATGATTGCGCACGT 320 Score = 132 bits (146), Expect = 4e-26 Identities = 224/321 (70%), Gaps = 5/321 (2%) Strand=Plus/Minus Query 6617 ACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAAC 6676 || || || |||||||| || ||||| || || ||||||||||| || ||||| || | Sbjct 320 ACGTGCGCAATCATGTAAGTAAGCAGTGCATAGCTAGCAATGTTAAAGGGCACGCCCAGG 261 Query 6677 CCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACA---GCTCCCCATTCGCGACGTAG 6733 ||||| ||| | |||| ||| || | ||||||||||| || | | | | ||| ||| Sbjct 260 CCCATATCTGCAGATCTTTGGTATAACTGGCAGGACAAATACTTCTCCTCGGAGACATAG 201 Query 6734 AATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCAC 6793 ||||| | | ||||||||| || || |||||| | | ||||| |||||||| Sbjct 200 AATTGCACCATGCAGTGGCACGGAGGAAGTGCCATCTGGGACAGATCTGCTGGGTTCCAG 141 Query 6794 GCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGC 6853 ||||| | || || || | ||| | || || | ||| ||| |||||||| | || Sbjct 140 GCGCAGAGCATAATTCTGCGGTCGTTGGGATTTGTCCTCAGGGTTTCGATCACTTGCTTG 81 Query 6854 AGCTGGTCCGCTCCCTGTCCCGAATAGTCCG-CTTCGCTCCCCCGATACTCCGCCCCAAA 6912 ||||| || | ||||| |||| ||||| | ||| | || || | || ||||| Sbjct 80 AGCTGATCAACACCCTGGCCCGTGTAGTCTGTGTTCATGTCAACG-TATTTGGCTCCAAA 22 Query 6913 GTGTCTCCACTGGAACCCGTA 6933 ||| | |||||| || ||||| Sbjct 21 GTGGCGCCACTGAAATCCGTA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 446122703482800