Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baetis_20rhodani_20[genbank_20GCA_5F001676355.1_202016-06-24] 381,865 sequences; 174,117,300 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq149171 98.7 8e-16 >seq149171 Length=352 Score = 98.7 bits (108), Expect = 8e-16 Identities = 193/284 (68%), Gaps = 5/284 (2%) Strand=Plus/Minus Query 29711 TCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAG 29770 || ||||| || ||||| || |||||||| || || || | ||||| || ||||||||| Sbjct 332 TCCAGCCCTGTAACGTGCGCAATCATGTAAGTAAGCAGTGCATAGCTAGCAATGTTAAAG 273 Query 29771 GGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACG----AGAGCTCTCC 29826 ||||| || || ||||| || | || || ||||| | |||||| | | | ||||| Sbjct 272 GGCACGCCCAGGCCCATATCTGCAGATCTTTGGTATAACTGGCAGGACAAATACTTCTCC 213 Query 29827 GTCGCTCACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAGACCCAAGTC 29886 ||| || || || || |||| |||||||||||||| ||||| | || || Sbjct 212 -TCGGAGACATAGAATTGCACCATGCAGTGGCACGGAGGAAGTGCCATCTGGGACAGATC 154 Query 29887 TTTGGGGTTCCAGGCACACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTC 29946 | ||||||||||| || | || || | | ||| | || || |||| | | || Sbjct 153 TGCTGGGTTCCAGGCGCAGAGCATAATTCTGCGGTCGTTGGGATTTGTCCTCAGGGTTTC 94 Query 29947 CACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTG 29990 | | | | |||||||| || ||| |||| |||||||| Sbjct 93 GATCACTTGCTTGAGCTGATCAACACCCTGGCCCGTGTAGTCTG 50 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404272924717390