Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baetis_20rhodani_20[genbank_20GCA_5F001676355.1_202016-06-24] 381,865 sequences; 174,117,300 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq347318 95.1 2e-14 seq303592 87.8 2e-12 seq298802 86.0 9e-12 >seq347318 Length=1073 Score = 95.1 bits (104), Expect = 2e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 78753 TTTTTTGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCA 78812 ||||| || |||||||| ||||| ||||| || ||||||||||| || | ||||||||| Sbjct 253 TTTTTGGTCTCCTTGTGCAGATTGGATACGGCGATTCTTGCAGCAAGCACTGCATAATCA 194 Query 78813 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCCGCTAAAATATCTAACTCTATAGTT 78872 ||||| | || || ||||||||| | || || || || | || | ||| | ||| Sbjct 193 GGATGCTTGGTGGTCATGGTGGCTGCTGTCTCAGCGGCCAAGTTGTCAAGCTCAACAGTG 134 Query 78873 GTGACCCCATTATATAGTCC 78892 ||||| ||| ||| ||||| Sbjct 133 GTGACTCCAGGATAAAGTCC 114 >seq303592 Length=754 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 77031 TGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTC 77090 |||||||| || || | || || || || |||| || |||||||||||| | | Sbjct 438 TGAATGGATCCTCCGTGAGAAATGATAGTGGTCTTGATGCCATCATTCCACAGGCCCTGC 379 Query 77091 TCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTA 77150 || || | |||| || || ||| | || || | ||| ||||||||||| | || | Sbjct 378 TCGGTCAGGTCTCTGAGCAGGTGATGGTTGACAACTTGGAATTCTCCAGAAAGCACACGG 319 Query 77151 CGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCA 77210 || ||||| || || ||| ||||| || | || ||||| || | || |||||| Sbjct 318 CGGGTGTAGATGTTGGAGGTGTATGGCTCAATGCTCTCGTTGTTGCCGAGGATCTGAGCA 259 Query 77211 GTAGAAGCAGTTGGCATAGGTGCCACCA 77238 || || ||||||||||| || || |||| Sbjct 258 GTGGAGGCAGTTGGCATGGGAGCAACCA 231 >seq298802 Length=733 Score = 86.0 bits (94), Expect = 9e-12 Identities = 146/210 (70%), Gaps = 4/210 (2%) Strand=Plus/Plus Query 77031 TGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATCATTCCACAATTTCCT- 77089 |||||||| || || | || || || || |||| || |||||||||||| ||| Sbjct 304 TGAATGGATCCTCCGTGAGAAATGATAGTGGTCTTGATGCCATCATTCCACAGG--CCTT 361 Query 77090 -CTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTC 77148 ||| || | |||| || || ||| | || || | ||| ||||||||||| | || | Sbjct 362 GCTCAGTCAGGTCTCTGAGCAGGTGATGGTTGACAACTTGGAATTCTCCAGAGAGCACAC 421 Query 77149 TACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAG 77208 || ||||| || || ||| ||||| || | || ||||| || | || |||| Sbjct 422 GGCGGGTGTAGATGTTGGAGGTGTATGGCTCAATGCTCTCGTTGTTGCCGAGGATCTGAG 481 Query 77209 CAGTAGAAGCAGTTGGCATAGGTGCCACCA 77238 |||| || || |||||||| || ||||||| Sbjct 482 CAGTGGAGGCGGTTGGCATGGGAGCCACCA 511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691352928733600