Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq596 114 1e-20
seq496 91.5 2e-13
>seq596
Length=46163
Score = 114 bits (126), Expect = 1e-20
Identities = 378/581 (65%), Gaps = 10/581 (2%)
Strand=Plus/Plus
Query 16036 ATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAA-GTCGTA 16094
||| || || || || || |||| | |||||| |||| || || || | | |||| |
Sbjct 2613 ATCGGCCACGAACTCGATGTATTCAGACATTAGTCCGCAGTTCATGCCGAGCATGTCGCA 2672
Query 16095 CCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATATCGG 16154
| ||||| || | || | ||| | |||||| ||| || || ||| ||||| |||
Sbjct 2673 C-GGAAGGGCGTCGGTCAGAAACTCTTGTTCAATCTTTACAGCCTCTGAGATGATCTCGA 2731
Query 16155 TGGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACACGCGAAGTCGC 16214
| | ||| | | || | || | || ||| | ||||| || || || ||||| |
Sbjct 2732 TAACGCGTTCCTTTGGTGGCTTCTGTTCAAGATGTCTGAACATCAGGCAAGCAAAGTCAC 2791
Query 16215 AATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTC 16274
| || | || ||||| | ||| |||||||| || || || | |||||||| |
Sbjct 2792 AGTGCAAGCCCTCGTCACGTGAGATGAGTTCGTTTGAGAAGGTGAGACCTGGCATCAAAC 2851
Query 16275 CTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAG 16334
| || ||||| | |||||| || | ||||| || ||||| || || || ||||
Sbjct 2852 CGCGCTTCTTGAGCCAGAAGATTGAGGCAAAGCTTCCGCTGAAGAAAATTCCTTCGACAG 2911
Query 16335 ATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCATTTCTGTA 16394
||||| ||||| | ||||| | | |||| | | | | ||||| | |
Sbjct 2912 CAGCAAAGGCGATAATGCGTTCTCCAAAGTTAGCCTTTGTGCTGGCGATCCAGTCCAAGG 2971
Query 16395 CCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCT--ATGGCCTTAAACAATTTCTC 16452
|||| || || |||| |||| ||| | | | |||| | ||| || || | ||
Sbjct 2972 CCCAGTCAGCCTTTTTCTTTACACA--CGGTAGATTCTCGACGGCGTTGAAAAGGAAGTC 3029
Query 16453 TTTTTCCT--GAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGT 16510
|||| || | || | || || || ||||| || | |||||| || |||||
Sbjct 3030 GCGCTCCTTTGAGTCTCTA--ATGTAGGTTTCAATGAGAAGCGAGTACATCTCGGAGTGG 3087
Query 16511 ATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCC 16570
| || || ||||| ||||| || ||||||||||| || ||||| | | ||| ||||||
Sbjct 3088 ACATTTTCCATGGCGATCTGGAAGCCATAGAAGCAACGGGCCTCTGTGACTTGCACTTCC 3147
Query 16571 ACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTC 16611
| || ||||| | |||||||| || ||||| |||||
Sbjct 3148 TGGCTGAACCGTTCAACGAGGTTCTCGTTAACGATGCCGTC 3188
>seq496
Length=57215
Score = 91.5 bits (100), Expect = 2e-13
Identities = 184/265 (69%), Gaps = 10/265 (4%)
Strand=Plus/Minus
Query 118930 TCGAATTTCATGTATCGTATCTTTCCAAATACGGTACGCTCCTTCCATGCTCTGTCGTGG 118989
||| | ||||| || | ||||| || ||||| || || ||||| | |||||||
Sbjct 40839 TCGTAGTTCATATACCTGATCTTGCCGAATACATCTCGTTCTTTCCAGCCCATGTCGTGA 40780
Query 118990 AGTCCTGCTACTGC-CCATAGACATCCCACGTATCCGTTGGGATCTGTTCCGTCTAACTC 119048
| |||| | | ||| ||| | ||||| ||||||||||| ||||| |||||| || |
Sbjct 40779 ATTCCTCCAA-TGCTCCACATGCATCCGACGTATCCGTTTGGATCACGTCCGTCCAAGTT 40721
Query 119049 GTACTTATCGTTTAAGTAGATA-CAGACGCTTAACGCACTT--TCCGGAGTCTTAC-TCC 119104
||| |||||| | ||||||| ||| || | | ||| || || || | || |||
Sbjct 40720 GTAGCGATCGTTGAGGTAGATAGCAGTGGC---AAGAGCTTCATCTGGCGT-TGACATCC 40665
Query 119105 ATTCCAGTAtttttttAGCCCAGTACATACGTAAATACCCGTGCATTTTACCCTCGTTAA 119164
| || || || || || ||||||||||| || | | ||||||||||| || || ||
Sbjct 40664 ACTCGAGGATCTTCTTGGCCCAGTACATTCGAAGGAAACCGTGCATTTTGCCTTCTTTGC 40605
Query 119165 TCATCTGAAGTTGTGCGGTGTTCCA 119189
|| ||| ||| |||| |||||
Sbjct 40604 GCAACTGGTTTTGAGCGGCATTCCA 40580
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511382455778040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |