Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq596 114 1e-20 seq496 91.5 2e-13 >seq596 Length=46163 Score = 114 bits (126), Expect = 1e-20 Identities = 378/581 (65%), Gaps = 10/581 (2%) Strand=Plus/Plus Query 16036 ATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAA-GTCGTA 16094 ||| || || || || || |||| | |||||| |||| || || || | | |||| | Sbjct 2613 ATCGGCCACGAACTCGATGTATTCAGACATTAGTCCGCAGTTCATGCCGAGCATGTCGCA 2672 Query 16095 CCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATATCGG 16154 | ||||| || | || | ||| | |||||| ||| || || ||| ||||| ||| Sbjct 2673 C-GGAAGGGCGTCGGTCAGAAACTCTTGTTCAATCTTTACAGCCTCTGAGATGATCTCGA 2731 Query 16155 TGGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACACGCGAAGTCGC 16214 | | ||| | | || | || | || ||| | ||||| || || || ||||| | Sbjct 2732 TAACGCGTTCCTTTGGTGGCTTCTGTTCAAGATGTCTGAACATCAGGCAAGCAAAGTCAC 2791 Query 16215 AATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTC 16274 | || | || ||||| | ||| |||||||| || || || | |||||||| | Sbjct 2792 AGTGCAAGCCCTCGTCACGTGAGATGAGTTCGTTTGAGAAGGTGAGACCTGGCATCAAAC 2851 Query 16275 CTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAG 16334 | || ||||| | |||||| || | ||||| || ||||| || || || |||| Sbjct 2852 CGCGCTTCTTGAGCCAGAAGATTGAGGCAAAGCTTCCGCTGAAGAAAATTCCTTCGACAG 2911 Query 16335 ATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCATTTCTGTA 16394 ||||| ||||| | ||||| | | |||| | | | | ||||| | | Sbjct 2912 CAGCAAAGGCGATAATGCGTTCTCCAAAGTTAGCCTTTGTGCTGGCGATCCAGTCCAAGG 2971 Query 16395 CCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCT--ATGGCCTTAAACAATTTCTC 16452 |||| || || |||| |||| ||| | | | |||| | ||| || || | || Sbjct 2972 CCCAGTCAGCCTTTTTCTTTACACA--CGGTAGATTCTCGACGGCGTTGAAAAGGAAGTC 3029 Query 16453 TTTTTCCT--GAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGT 16510 |||| || | || | || || || ||||| || | |||||| || ||||| Sbjct 3030 GCGCTCCTTTGAGTCTCTA--ATGTAGGTTTCAATGAGAAGCGAGTACATCTCGGAGTGG 3087 Query 16511 ATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCC 16570 | || || ||||| ||||| || ||||||||||| || ||||| | | ||| |||||| Sbjct 3088 ACATTTTCCATGGCGATCTGGAAGCCATAGAAGCAACGGGCCTCTGTGACTTGCACTTCC 3147 Query 16571 ACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTC 16611 | || ||||| | |||||||| || ||||| ||||| Sbjct 3148 TGGCTGAACCGTTCAACGAGGTTCTCGTTAACGATGCCGTC 3188 >seq496 Length=57215 Score = 91.5 bits (100), Expect = 2e-13 Identities = 184/265 (69%), Gaps = 10/265 (4%) Strand=Plus/Minus Query 118930 TCGAATTTCATGTATCGTATCTTTCCAAATACGGTACGCTCCTTCCATGCTCTGTCGTGG 118989 ||| | ||||| || | ||||| || ||||| || || ||||| | ||||||| Sbjct 40839 TCGTAGTTCATATACCTGATCTTGCCGAATACATCTCGTTCTTTCCAGCCCATGTCGTGA 40780 Query 118990 AGTCCTGCTACTGC-CCATAGACATCCCACGTATCCGTTGGGATCTGTTCCGTCTAACTC 119048 | |||| | | ||| ||| | ||||| ||||||||||| ||||| |||||| || | Sbjct 40779 ATTCCTCCAA-TGCTCCACATGCATCCGACGTATCCGTTTGGATCACGTCCGTCCAAGTT 40721 Query 119049 GTACTTATCGTTTAAGTAGATA-CAGACGCTTAACGCACTT--TCCGGAGTCTTAC-TCC 119104 ||| |||||| | ||||||| ||| || | | ||| || || || | || ||| Sbjct 40720 GTAGCGATCGTTGAGGTAGATAGCAGTGGC---AAGAGCTTCATCTGGCGT-TGACATCC 40665 Query 119105 ATTCCAGTAtttttttAGCCCAGTACATACGTAAATACCCGTGCATTTTACCCTCGTTAA 119164 | || || || || || ||||||||||| || | | ||||||||||| || || || Sbjct 40664 ACTCGAGGATCTTCTTGGCCCAGTACATTCGAAGGAAACCGTGCATTTTGCCTTCTTTGC 40605 Query 119165 TCATCTGAAGTTGTGCGGTGTTCCA 119189 || ||| ||| |||| ||||| Sbjct 40604 GCAACTGGTTTTGAGCGGCATTCCA 40580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511382455778040