Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq154 107 1e-18 >seq154 Length=135386 Score = 107 bits (118), Expect = 1e-18 Identities = 255/380 (67%), Gaps = 4/380 (1%) Strand=Plus/Plus Query 101644 TGGAAACGGTCTAGGAGTTCGCGTCAA-CTGCATTTTAAGAGCATCAATGTGATCTACAT 101702 ||| |||||||| || | || ||||| |||| || | || || ||||||| || | Sbjct 90457 TGGGAACGGTCTCGGCTTGCG-GTCAAGCTGCCCCTTCAAAGGCTCGATGTGATTTAAGT 90515 Query 101703 AGATGTGAGCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAG 101762 ||| ||| | ||||| | || ||||| || || || || | || |||||||||| Sbjct 90516 AGACGTGCGTGTCTCCGAGAGCGTGGATGAAATCACCCGGTTTCAAGTTCGTGACATGAG 90575 Query 101763 CAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATAT 101822 |||||||| || | ||||| || |||||||| || || ||||| | ||||| | Sbjct 90576 CAATCATGTTCGTGAGAAGAGCGTAAGACGCAATGTTGAAGGGAACTCCAAGGCCCATGT 90635 Query 101823 CAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAATTGACTTA 101882 | ||||||| ||| || | ||| ||| || | || || ||| || || ||| Sbjct 90636 CGGCTGATCGTTGGTATAATTGGCAGCTGAGTTCACCGTCTGCGACGTAGAACTGA-GCC 90694 Query 101883 ATACA-TGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATT 101941 | ||| |||||||||||||| |||||| |||| | | |||||||| | || Sbjct 90695 AGACAGTGACAAGGCGGCAAAGCCATTTGGGGAACCTGAGCTGGGTTCCAAGCGCTCAAA 90754 Query 101942 AACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCA 102001 | || | | || | || || |||||||| ||||| | | || || |||||| Sbjct 90755 ATAATGCGACGGTCGTTTGGATTAGTTTTTATGCGTTCAATGATGTCCTTCAACTGGTCA 90814 Query 102002 ACTCCTTCTCCTTTATAATC 102021 || |||| ||| | ||||| Sbjct 90815 ACACCTTTTCCAGTGTAATC 90834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361229199463247