Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq1280 208 9e-49
seq596 183 4e-41
>seq1280
Length=9399
Score = 208 bits (230), Expect = 9e-49
Identities = 839/1302 (64%), Gaps = 36/1302 (3%)
Strand=Plus/Minus
Query 53380 CGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAG-CTAGTTCACAACTCGCCTCTA 53438
||||||| | || || ||||| | || || ||| | | ||||||||||| ||||| |
Sbjct 2688 CGATCCTTCGTAGGTTTCGTAAGTACCGAGCT-CTCTGGCGAGTTCACAACTTGCCTCAA 2630
Query 53439 ATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTA- 53497
|| ||||| || || || |||||||||| || || || | ||||| | ||| |
Sbjct 2629 GCGCGCCGTAGTAGATCGTCTCGAAGATCTGCTGGTTCAGCTTCTGTGCGTTT-GGCGAC 2571
Query 53498 TCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATA 53557
|| || |||||| | | || || ||||| || | ||||||| || ||||||||
Sbjct 2570 TCGAACGGATAACTCATCGTGATGAAAGCGTCGGCCAGGCCTTGAATGCCGATACCGATC 2511
Query 53558 GGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATA 53617
|| | ||| | | | || || | ||| ||||| || || || || || | ||| ||
Sbjct 2510 GGGCGATGACGCATGTTCGATCGCTTAGCCTCTGGGATCGGGTAGTAGTTGACATCGATG 2451
Query 53618 ATTTTATTGAGGTT---TCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCA 53674
|| || || | ||| | ||||| | ||| || ||||| || || | || ||
Sbjct 2450 ATCTTGTTCAAGTTCTTTGTGACAGTC---TTGGTGACTTCCTTGAGCTTTTGGAAGTCG 2394
Query 53675 AA----TTGTCC-ATCTATT-ACAAACATGTTCAATGCAATAGATGCCAGATTACAAACG 53728
| ||| | || || ||||||||||| | || || ||||||||||| || |||
Sbjct 2393 TAAGTCTTGGCTGATGCGTTCACAAACATGTTGACAGCGATCGATGCCAGATTGCAGACG 2334
Query 53729 GCTACCTCATTAGCATCC--GCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGA 53786
|| || || | | | | | ||| | || || || ||||| | || || |
Sbjct 2333 GCGACTTCGTC--CTTGCTGGAATACTCGATGATTTCCGTGCACAAGTTGGAGCAACGAA 2276
Query 53787 TGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATG 53846
|||| || | || || || || |||| ||| || || ||||| || | ||| | |
Sbjct 2275 TGGTGCCGACGTTCTGCTGGTTCGACTTTCGGTTGCAAGCGTCCTTGTACAACATGTAAG 2216
Query 53847 GCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTA 53906
|||| ||||| || | || || || || || || ||| | | | ||||||| ||
Sbjct 2215 GCGTGCCAGTCTCGACTTGTGACTCGATGATGGCAAACCACAAGTCTTGAGCCTTGATCT 2156
Query 53907 TAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCC 53966
||| | ||| ||||||| ||||| || ||||| || ||||
Sbjct 2155 GGCGGAGGTAACGGCCTTCGGCTTCGTATCTCTCGTACAACTTCTCGAACTCTTCGCCCC 2096
Query 53967 AAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCT 54026
| | || | || ||||| | |||||||||||||||||| |||||| | |
Sbjct 2095 ACGAGTCGTAGAGGCCTGGACAGCTGTGCGGACACATCAACGACCAGACTCCGTTG-CTT 2037
Query 54027 TCA-CTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTA 54085
||| | || ||| || | ||| |||||||| | ||| || | || | | | |
Sbjct 2036 TCAACGCGACGCATGAACAAATCGGGAATCCACAAAGCGTAGAACATGTCACGAGCACGA 1977
Query 54086 TGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCAC 54145
||| || || || || || || || |||||||||||| | | | || ||||||
Sbjct 1976 ACTTCTTCTTTGCCAGTGTTTTTCTTGAGATCGAGGAACTCGAAGACGTCGCCGTGCCAC 1917
Query 54146 GGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTA 54205
|| || | || || | | | | || || || |||||||| || || |||| || | |
Sbjct 1916 GGCTCGAGATAAATTGCGAAAGCACCTGGTCGCTTGTTTCCGCCTTGGTCTACATAGCGA 1857
Query 54206 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCG 54265
|||||||| || ||||| | ||||||||||| || || || || || ||||| |||
Sbjct 1856 GCGGTGTTGTTGTAAACACGCAACATTGGAACAAGTCCGTTTGAGATCCCGTTGGTGCCG 1797
Query 54266 GAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGACCTATCCCCCCTGCCA 54323
| |||||| |||| |||| ||||| | | | ||| | ||| || || || |||
Sbjct 1796 GCGATATACGTTCCCTTGGCGCGAATACAGTGCACGTTG--ACACCGATACCGCCAGCCG 1739
Query 54324 TTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCA 54383
|| ||| || |||||| |||| | |||||| || ||||| || || |||||
Sbjct 1738 ACTTGCTGATCAAAGCGCATTGTTTCAGCGTATCGTAAATGCCGTCAATTGAGTCATCGG 1679
Query 54384 TCAT-GTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAG 54442
||| | || || ||||| || | || | ||| || | || || |
Sbjct 1678 ACATCGACAACAAG-AAACACGACGAAAGCTGCGGGCGAGGCGTAGCGGCGGCGAAGAGA 1620
Query 54443 GTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAG 54502
|| || || || || || || | |||||| | || ||||| ||||| || || |||
Sbjct 1619 GTTGGCGAGGCATGGGTGAAGTAGCGTTCAGACAAAAGGTTGTAAGTCTCAATGGCCGAG 1560
Query 54503 TCTATATC----CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCT 54558
|| || || |||| |||| || || || || | ||| | |||||| || || |
Sbjct 1559 TCGATGTCTTCACCATGGATG----CCCACGGCAACTCTCATGAGCATGTGTTGCGGGCG 1504
Query 54559 TTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 54618
|| |||||||| || | |||||||||||| |||||||| || || || ||
Sbjct 1503 CTCGGCGATCTTGCCTTTGTTCTTCAGCAAGTAGCTGCGCTCCAAAGTCTTGAATCCGAA 1444
Query 54619 ATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTT 54660
|| ||||| ||||| || ||||| || || | |||||
Sbjct 1443 GTAATTGTAGCCGAAGTCGCGGTCGTAGATGATGGCAGAGTT 1402
>seq596
Length=46163
Score = 183 bits (202), Expect = 4e-41
Identities = 546/834 (65%), Gaps = 19/834 (2%)
Strand=Plus/Plus
Query 23844 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 23903
||||||||||| ||||| || ||||| ||||| || || || || | || || |
Sbjct 2488 TTTTGGTATTCTCCCACTTTCTTCTCGAAGAAATTCGTCTTTCCCTCGAGCGAGATCGAT 2547
Query 23904 TCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAAATC 23963
|||||||| | | ||||| | ||| ||||| || || ||| | || || |
Sbjct 2548 TCCATGAAGGAGAAGGGATTTTTGGTATTGTAGATCTTTCCAACTCCAAGCTCGGACAGA 2607
Query 23964 AATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAA-G 24022
| | ||| || || ||||| || ||| ||| | | | || ||||| || | | |
Sbjct 2608 AGACGATCGGCCACGAACTCGATGTATTCAGACATTAGTCCGCAGTTCATGCCGAGCATG 2667
Query 24023 TTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 24082
| || ||||| || | || ||||| ||||||||||| || || |||| || ||
Sbjct 2668 TCGCAC-GGAAGGGCGTCGGTCAGAAACTCTTGTTCAATCTTTACAGCCTCTGAGATGAT 2726
Query 24083 AGATCTTACTGTTTCTTCACTCGGTGGATACAAT---AAATGTTTAAACATCAAACATGC 24139
| || ||| | | ||||| | | | | |||| | ||||||| || ||
Sbjct 2727 CTCGATAACGCGTTCCT---TTGGTGGCTTCTGTTCAAGATGTCTGAACATCAGGCAAGC 2783
Query 24140 GAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGG 24199
|| || ||||| | |||||||| | || | |||||| || || ||||| || ||
Sbjct 2784 AAAGTCACAGTGCAAGCCCTCGTCACGTGAGATGAGTTCGTTTGAGAAGGTGAGACCTGG 2843
Query 24200 CATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCC 24259
||| | || ||||| || ||||| || || || ||||| ||| |||||||||||
Sbjct 2844 CATCAAACCGCGCTTCTTGAGCCAGAAGATTGAGGCAAAGCTTCCGCTGAAGAAAATTCC 2903
Query 24260 TTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCA----TAACC--GGCGCTGTCATGTAT 24313
||| || || |||||||| |||| | ||||||| || || | |||| | ||
Sbjct 2904 TTCGACAGCAGCAAAGGCGATAATGCGTTCTCCAAAGTTAGCCTTTGTGCTGGC---GAT 2960
Query 24314 CCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAA 24373
||| | ||||| || ||||| || |||||||| || | |||| | || || ||
Sbjct 2961 CCAGTCCAAGGCCCAGTCAGCCTTTTTCTTTACACACGGTAGATTCTCGACGGCGTTGAA 3020
Query 24374 GAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTC 24433
|| ||| || || ||| ||| || || ||||| | ||| ||||| ||
Sbjct 3021 AAGGAAGTCGCGCTCCTTTGAGTCTCTAATGTAGGTTTCAATGAGAAGCGAGTACATCTC 3080
Query 24434 CGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTG 24493
|| || | ||||| ||||| || || || || ||||| || | ||||| || | ||
Sbjct 3081 GGAGTGGACATTTTCCATGGCGATCTGGAAGCCATAGAAGCAACGGGCCTCTGTGACTTG 3140
Query 24494 TACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAA 24553
||||| | || ||||| | | || || || || || ||||| ||||| ||
Sbjct 3141 CACTTCCTGGCTGAACCGTTCAACGAGGTTCTCGTTAACGATGCCGTCGGAAGCTGCGAA 3200
Query 24554 AAACGCCAATACATGTTTTATAAAAT-ATTTTTCGTCTGGTGTTAGTTTATTCCAATCAT 24612
|| |||| ||||| ||||||| | | || | | | | || ||||| || |
Sbjct 3201 GAAGGCCAGAACATGGGAGATAAAATGACGCTCGGTGTCCT-TCAAGTTGTTCCAGTCGT 3259
Query 24613 TGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 24666
| || || || || | ||| ||||||||||||||||||||||| || || ||||
Sbjct 3260 TCATGTCCTTTGACAAATCGACTTCTTCCACTGTCCAAAATGAAGCTTCAGCCT 3313
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593684514664560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |