Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq596 333 3e-86
seq108 136 4e-27
seq29 122 9e-23
seq1975 82.4 8e-11
>seq596
Length=46163
Score = 333 bits (368), Expect = 3e-86
Identities = 515/726 (71%), Gaps = 16/726 (2%)
Strand=Plus/Minus
Query 116655 AGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACT 116714
|||| || || || || ||||| || || || || || |||| ||||||| || |||||
Sbjct 3313 AGGCTGAAGCTTCATTTTGGACAGTGGAAGAAGTCGATTTGTCAAAGGACATGAACGACT 3254
Query 116715 GGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCG 116774
|| | |||||| |||| |||||| ||||| ||| || || |||||||| ||||| |
Sbjct 3253 GGAACAACTTGAAGGACACCGAGCGTCATTTTATCTCCCATGTTCTGGCCTTCTTCGCAG 3194
Query 116775 CCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGG 116834
| |||||||||||| |||||||| || || || || ||| ||||| ||||| ||
Sbjct 3193 CTTCCGACGGCATCGTTAACGAGAACCTCGTTGAACGGTTCAGCCAGGAAGTGCAAGTCA 3134
Query 116835 CCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGT 116894
| ||||| || |||||||| ||||| |||||||||||||| || || ||||| || ||||
Sbjct 3133 CAGAGGCCCGTTGCTTCTATGGCTTCCAGATCGCCATGGAAAATGTCCACTCCGAGATGT 3074
Query 116895 ATTCGACCCTCATCGACACGTACGTGCG---CTCTTCGGAG-GAGAAGCTCCGTTTGTTG 116950
| ||| ||||| || || ||| | | ||| |||| | || || | || ||
Sbjct 3073 ACTCGCTTCTCATTGAAACCTACATTAGAGACTCAAAGGAGCGCGA--CTTCCTT--TTC 3018
Query 116951 AACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATC 117010
|||||| |||||| | ||||| || || | ||||| || ||||| || |||||||
Sbjct 3017 AACGCCGTCGAGAATCTACCGTGTGTAAAGAAAAAGGCTGACTGGGCCTTGGACTGGATC 2958
Query 117011 GCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTC 117070
||| ||| | |||| ||| || || ||| | | ||||| || || ||||| || |
Sbjct 2957 GCCAGCACAAAGGCTAACTTTGGAGAACGCATTATCGCCTTTGCTGCTGTCGAAGGAATT 2898
Query 117071 TTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGC 117130
||||| || || || ||| | || || ||||||||||| ||||| | ||||| ||
Sbjct 2897 TTCTTCAGCGGAAGCTTTGCCTCAATCTTCTGGCTCAAGAAGCGCGGTTTGATGCCAGGT 2838
Query 117131 CTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGT 117190
|| || ||| ||||| |||||||| | |||||||| |||| || |||||||| ||
Sbjct 2837 CTCACCTTCTCAAACGAACTCATCTCACGTGACGAGGGCTTGCACTGTGACTTTGCTTGC 2778
Query 117191 TTGCTGTTCAAGCAT-TTG--GTGCAGCGACCGAGCGCGGCGCGCGTCAGGGAGATCGTC 117247
|| |||||| ||| ||| | ||| ||| | || ||||| | |||||| ||
Sbjct 2777 CTGATGTTCAGACATCTTGAACAGAAGCCACCAA---AGGAACGCGTTATCGAGATCATC 2721
Query 117248 ACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGTGCGTC-TGCT 117306
| || || || || || || || || ||||| || || || ||||| | ||||
Sbjct 2720 TCAGAGGCTGTAAAGATTGAACAAGAGTTTCTGACCGACGCCCTTCC-GTGCGACATGCT 2662
Query 117307 GGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTGCT 117366
|| | || |||| | ||||| |||||||||||||||| ||||| | || |||
Sbjct 2661 CGGCATGAACTGCGGACTAATGTCTGAATACATCGAGTTCGTGGCCGATCGTCTTCTGTC 2602
Query 117367 CGAGCT 117372
||||||
Sbjct 2601 CGAGCT 2596
>seq108
Length=162490
Score = 136 bits (150), Expect = 4e-27
Identities = 156/207 (75%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| |||||||| ||||| ||||| ||||| ||||| ||||||||| |||| ||||| |||
Sbjct 112066 AAGATGCAAATCTTCGTGAAAACCCTCACCGGCAAGACCATCACCCTCGAGGTCGA-GCC 112008
Query 40747 ACCG-ACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805
| || ||| | ||| |||||| || || | ||||| || ||||| || | ||
Sbjct 112007 ATCGGACACAATTGAAAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATTCCTCCAGA 111948
Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865
||||| || || |||| ||| ||||| ||||| || |||| ||||| | | ||||||
Sbjct 111947 TCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTTGAAGACGGTCGCACATTGAGCGACTA 111888
Query 40866 CAACATCCAGAAGGAGGCCACGCTGCA 40892
|||||| ||||||||| | || || ||
Sbjct 111887 CAACATTCAGAAGGAGTCGACACTTCA 111861
>seq29
Length=258594
Score = 122 bits (134), Expect = 9e-23
Identities = 151/204 (74%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| ||||| | ||||| |||||||| ||| |||| || || |||| |
Sbjct 96423 ATGCAAATCTTCGTCAAAACATTGACGGGTAAAACCATTACCCTCGAGGTTGA-GCCATC 96481
Query 40750 G-ACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
| ||| | ||| |||||| || || | |||||||| ||||| ||| | |||||
Sbjct 96482 GGACACTATCGAAAATGTCAAGGCCAAGATCCAGGACAAAGAAGGCATTCCCCCAGACCA 96541
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| ||| | |||| ||| || || || |||| || | || || || | |||||||||
Sbjct 96542 GCAGCGATTGATCTTCGCCGGAAAGCAATTGGAAGATGGACGTACTCTGAGCGACTACAA 96601
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
|||||| |||||| | || || ||
Sbjct 96602 CATCCAAAAGGAGTCGACACTTCA 96625
>seq1975
Length=2172
Score = 82.4 bits (90), Expect = 8e-11
Identities = 93/125 (74%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 40768 AAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCG 40827
|||| ||| || | || || || || |||||| | |||||||| ||| | |||| ||
Sbjct 2135 AAGGCAAAGATCCAGGATAAGGAAGGAATCCCCCCAGACCAGCAGCGATTGATCTTTGCT 2076
Query 40828 GGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACG 40887
|| || ||||| || || | |||||| | | |||||||||||||||||| || | ||
Sbjct 2075 GGAAAGCAGCTCGAAGATGGTCGCACCTTGAGCGACTACAACATCCAGAAAGAATCGACA 2016
Query 40888 CTGCA 40892
|||||
Sbjct 2015 CTGCA 2011
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515187018120720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |