Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq496 104 4e-17 >seq496 Length=57215 Score = 104 bits (114), Expect = 4e-17 Identities = 181/261 (69%), Gaps = 2/261 (1%) Strand=Plus/Plus Query 189452 TGGAACGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGCATAGTTTTTTACGAATG 189511 ||||| || | |||| ||| || | |||||| |||||||| |||| | |||||| Sbjct 40580 TGGAATGCCGCTCAAAACCAGTTGCGCAAAGAAGGCAAAATGCACGGTTTCCTTCGAATG 40639 Query 189512 TATTGGGCTAAGAAGATACTTGAATGGACTAGAACACCTGAAGACGCTTTGAGTTATAGT 189571 || ||||| |||||||| || || |||| ||| || || || ||| | | | Sbjct 40640 TACTGGGCCAAGAAGATCCTCGAGTGGATGTCAACGCCAGATGAAGCTCTTGCCACTGCT 40699 Query 189572 ATCTATTTGAACAACAAGTACGAACTAGACGGCACG-GATCCTAACGGATACGTAGGTTG 189630 ||||| | ||| | ||| | | ||||| ||| ||||| ||||||||||| || || Sbjct 40700 ATCTACCTCAACGATCGCTACAACTTGGACGG-ACGTGATCCAAACGGATACGTCGGATG 40758 Query 189631 TATGTGGTCTATTTGCGGATTACACGATAGAGCGTGGAAAGAAAGACCGATATTTGGAAA 189690 |||||| ||| | ||| | ||||| | | ||||||||| || |||| || || Sbjct 40759 CATGTGGAGCATTGGAGGAATTCACGACATGGGCTGGAAAGAACGAGATGTATTCGGCAA 40818 Query 189691 GATAAGATATATGAATTATGA 189711 ||| || |||||||| || || Sbjct 40819 GATCAGGTATATGAACTACGA 40839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923139134819880