Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_002188.1
Length=288539
Score E
Sequences producing significant alignments: (Bits) Value
seq496 104 4e-17
>seq496
Length=57215
Score = 104 bits (114), Expect = 4e-17
Identities = 181/261 (69%), Gaps = 2/261 (1%)
Strand=Plus/Plus
Query 189452 TGGAACGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGCATAGTTTTTTACGAATG 189511
||||| || | |||| ||| || | |||||| |||||||| |||| | ||||||
Sbjct 40580 TGGAATGCCGCTCAAAACCAGTTGCGCAAAGAAGGCAAAATGCACGGTTTCCTTCGAATG 40639
Query 189512 TATTGGGCTAAGAAGATACTTGAATGGACTAGAACACCTGAAGACGCTTTGAGTTATAGT 189571
|| ||||| |||||||| || || |||| ||| || || || ||| | | |
Sbjct 40640 TACTGGGCCAAGAAGATCCTCGAGTGGATGTCAACGCCAGATGAAGCTCTTGCCACTGCT 40699
Query 189572 ATCTATTTGAACAACAAGTACGAACTAGACGGCACG-GATCCTAACGGATACGTAGGTTG 189630
||||| | ||| | ||| | | ||||| ||| ||||| ||||||||||| || ||
Sbjct 40700 ATCTACCTCAACGATCGCTACAACTTGGACGG-ACGTGATCCAAACGGATACGTCGGATG 40758
Query 189631 TATGTGGTCTATTTGCGGATTACACGATAGAGCGTGGAAAGAAAGACCGATATTTGGAAA 189690
|||||| ||| | ||| | ||||| | | ||||||||| || |||| || ||
Sbjct 40759 CATGTGGAGCATTGGAGGAATTCACGACATGGGCTGGAAAGAACGAGATGTATTCGGCAA 40818
Query 189691 GATAAGATATATGAATTATGA 189711
||| || |||||||| || ||
Sbjct 40819 GATCAGGTATATGAACTACGA 40839
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 923139134819880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |