Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq108 95.1 9e-15 seq29 95.1 9e-15 >seq108 Length=162490 Score = 95.1 bits (104), Expect = 9e-15 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| ||||||||| || || || ||||||||||||||| || ||| || ||| Sbjct 111852 AGAACCAAGTGAAGTGTCGACTCCTTCTGAATGTTGTAGTCGCTCAATGTGCGACCGTCT 111911 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 || | || ||||| || |||| || | || ||||| || | ||||||||| || Sbjct 111912 TCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATGCCTTCCTTGTCT 111971 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 || | |||||| | | ||| ||||| |||||| || | ||||||| | Sbjct 111972 TGGATCTTGGCCTTGACATTTTCAATTGTGTCCGATGGCTCGACCTCGAGGGTGATGGTC 112031 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328 |||||||| | ||||| || || |||||||| || Sbjct 112032 TTGCCGGTGAGGGTTTTCACGAAGATTTGCATCTT 112066 >seq29 Length=258594 Score = 95.1 bits (104), Expect = 9e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| ||||||||| || || ||||| |||||||||||| || || | |||| Sbjct 96634 AGGACCAAGTGAAGTGTCGACTCCTTTTGGATGTTGTAGTCGCTCAGAGTACGTCCATCT 96575 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||||||| || || || |||| | || || || || ||| | |||||| || || Sbjct 96574 TCCAATTGCTTTCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCTTTGTCC 96515 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 || | |||||| | | | | |||||| ||||| || | ||| ||| || Sbjct 96514 TGGATCTTGGCCTTGACATTTTCGATAGTGTCCGATGGCTCAACCTCGAGGGTAATGGTT 96455 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || || ||||||||||| || || |||||||| Sbjct 96454 TTACCCGTCAATGTTTTGACGAAGATTTGCAT 96423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379320897594765