Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq108 95.1 9e-15
seq29 95.1 9e-15
>seq108
Length=162490
Score = 95.1 bits (104), Expect = 9e-15
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
|| |||| ||||||||| || || || ||||||||||||||| || ||| || |||
Sbjct 111852 AGAACCAAGTGAAGTGTCGACTCCTTCTGAATGTTGTAGTCGCTCAATGTGCGACCGTCT 111911
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233
|| | || ||||| || |||| || | || ||||| || | ||||||||| ||
Sbjct 111912 TCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATGCCTTCCTTGTCT 111971
Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293
|| | |||||| | | ||| ||||| |||||| || | ||||||| |
Sbjct 111972 TGGATCTTGGCCTTGACATTTTCAATTGTGTCCGATGGCTCGACCTCGAGGGTGATGGTC 112031
Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328
|||||||| | ||||| || || |||||||| ||
Sbjct 112032 TTGCCGGTGAGGGTTTTCACGAAGATTTGCATCTT 112066
>seq29
Length=258594
Score = 95.1 bits (104), Expect = 9e-15
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
|| |||| ||||||||| || || ||||| |||||||||||| || || | ||||
Sbjct 96634 AGGACCAAGTGAAGTGTCGACTCCTTTTGGATGTTGTAGTCGCTCAGAGTACGTCCATCT 96575
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233
|||||||| || || || |||| | || || || || ||| | |||||| || ||
Sbjct 96574 TCCAATTGCTTTCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCTTTGTCC 96515
Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293
|| | |||||| | | | | |||||| ||||| || | ||| ||| ||
Sbjct 96514 TGGATCTTGGCCTTGACATTTTCGATAGTGTCCGATGGCTCAACCTCGAGGGTAATGGTT 96455
Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|| || ||||||||||| || || ||||||||
Sbjct 96454 TTACCCGTCAATGTTTTGACGAAGATTTGCAT 96423
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379320897594765
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |