Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq1280 643 1e-179
seq596 286 3e-72
seq29 134 1e-26
seq108 131 1e-25
>seq1280
Length=9399
Score = 643 bits (712), Expect = 1e-179
Identities = 1436/2142 (67%), Gaps = 36/2142 (2%)
Strand=Plus/Minus
Query 22105 CTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCC 22164
|||||| ||||| ||||| || ||||| || || || |||||||| | ||| ||||| ||
Sbjct 3273 CTTGTCGACTGTGAACTGAATTGCGTTGGCAGCTGGCTTGGTGCGCAAATAGTACATTCC 3214
Query 22165 CGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGG 22224
||||||| ||||| ||||| ||| || || || ||||||| |||||| || | ||
Sbjct 3213 GGTCTTCAAGCCCATTTTCCAGCCGTGGAAGTGAATTGACGTCAGTTTTCCGTAGTTTGG 3154
Query 22225 CAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGC 22284
| | | | || ||| ||||| ||||| ||||||||| ||||| || |||||||| ||
Sbjct 3153 CTCGGCGACGTGCACGTTGAATGACTGCGACTGATCGATGAACGCACCGCGATCGGCTGC 3094
Query 22285 CATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTC 22344
||| | ||| || | ||||| ||||| ||||||||||||| | | ||| ||
Sbjct 3093 CATCTGGATCTGCGTCTTGACTGACATCTCCCAGACGGTCTTGTACAACTCGCGGATGTC 3034
Query 22345 TAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAAT 22404
|| ||| ||||| |||| || || ||||| | |||||| || || ||
Sbjct 3033 GGCGGGGATCTTCTCGATGTTCTGAACTGATCCGTTGCTAGCGATGATCTCGTTCTTCAT 2974
Query 22405 CGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTG 22464
|||| ||| | | | |||| | ||| |||| ||||| | || || | ||
Sbjct 2973 GTCGTCGTCCCAGAGATCTCGTTCGGTGAGATCCTTGATGAGATGGTGATTGACGATCTG 2914
Query 22465 AAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTC 22524
||| || ||| || |||||| | ||| | |||| ||| |||| ||||| |||
Sbjct 2913 AAATTCTCCGCTCAGCGTGCGGCGGTTGTAGACGTTGCTGGTGTACGGCTCGAAGCTTTC 2854
Query 22525 ATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTT 22584
||||| || || ||||| || |||||||| |||||||| || || | || || || ||
Sbjct 2853 GTTGTTGCCGAGAATCTGTGCAGTCGAAGCAGTCGGCATTGGAGCGAGGAGAAGTGAATT 2794
Query 22585 TCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGACGG 22644
| || ||||||| | || ||| ||| || | | ||||||||||| | || ||
Sbjct 2793 GCGCACTCCGTGCTCGGCGATCTTAGCCTTCAGGACAGCCCAGTCCCACAAGTTGGTTGG 2734
Query 22645 CGTCACATTGTCCCACATATCGTATTGCAACACGCCG--CGACTCGCCGGGCTGCCTTCG 22702
||| || |||||||| ||||| ||||| | || |||| | ||| ||||||
Sbjct 2733 TGTC---TTTTCCCACATGTCGTACTGCAAGATTCCTTTCGACAC--CGGCGATCCTTCG 2679
Query 22703 TACGTTTCGTACGGACCATATATCGC-GGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTA 22761
|| |||||||| | ||| | || | ||| ||||| || || ||||| | |||||||||
Sbjct 2678 TAGGTTTCGTAAGTACCG-AGCTCTCTGGCGAGTTCACAACTTGCCTCAAGCGCGCCGTA 2620
Query 22762 ATATATAGTCTCGAAGATTTTCTTGTTCAA-TTCGGCGGC---GGCGACGCTTTCGTACG 22817
|| || ||||||||||| | || ||||| ||| | | |||||| ||| |||
Sbjct 2619 GTAGATCGTCTCGAAGATCTGCTGGTTCAGCTTCTGTGCGTTTGGCGAC----TCGAACG 2564
Query 22818 GCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGT 22877
| || |||| | | ||| ||||| |||| || |||| ||| ||||||||||| || |
Sbjct 2563 GATAACTCATCGTGATGAAAGCGTCGGCCAGGCCTTGAATGCCGATACCGATCGGGCGAT 2504
Query 22878 TTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGT 22937
|| ||||| || ||||| || | || || | || |||||| | |||
Sbjct 2503 GACGCATGTTCGATCGCTTAGCCTCTGGGATCGGGTAGTAGTTGACATCGATGATCTTGT 2444
Query 22938 TCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAAC---GC 22994
||||||| | || ||| | || || | | ||||||||| |
Sbjct 2443 TCAAGTTCTTTGTGACAGTCTTGGTGACTTCCTTGAGCTTTTGGAAGTCGTAAGTCTTGG 2384
Query 22995 CCGATT-GTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCG 23053
| ||| || || ||||| ||||||| |||||||| || |||||||| ||||| || |||
Sbjct 2383 CTGATGCGTTCA-CAAACATGTTGACAGCGATCGATGCCAGATTGCAGACGGCGACTTCG 2325
Query 23054 TCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAA 23113
|| ||| | ||||| | ||||| || || | ||| || || ||||| |
Sbjct 2324 TCCTTGCTGGAATACTCGATGATTTCCGTGCACAAGTTGGAGCAACGAATGGTGCCGACG 2265
Query 23114 TTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTC 23173
|| |||||| ||||| ||||| | |||||||| | |||||| |||||||| |||
Sbjct 2264 TTCTGCTGGTTCGACTTTCGGTTGCAAGCGTCCTTGTACAACATGTAAGGCGTGCCAGTC 2205
Query 23174 TCGACCTGCGACTCGATGATCGCTCGCCACATAGTCT-GAGCGTGAACACGTCGCACGTA 23232
||||| || ||||||||||| || ||||| ||||| |||| | | | || | |||
Sbjct 2204 TCGACTTGTGACTCGATGATGGCAAACCACA-AGTCTTGAGCCTTGATCTGGCGGAGGTA 2146
Query 23233 CCTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGC 23292
| |||||| | ||||| | | ||||||| || || || | || | |||||
Sbjct 2145 ACGGCCTTCGGCTTCGTATCTCTCGTACAACTTCTCGAACTCTTCGCCCCACGAGTCGTA 2086
Query 23293 CAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCT 23352
||||| || | ||||||||| | ||| | | || |||||||||| |
Sbjct 2085 GAGGCCTGGACAGCTGTGCGGACACATCAACGACCAGACTCCGTTGCTTTCAACGCGACG 2026
Query 23353 CATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTT 23412
||| || | ||| || ||||| | ||||||||||| || || || || || || |||||
Sbjct 2025 CATGAACAAATCGGGAATCCACAAAGCGTAGAACATGTCACGAGCACGAACTTCTTCTTT 1966
Query 23413 GCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTA 23472
||| ||||| || || | ||| | || || || ||||| | |||||||||||||| ||
Sbjct 1965 GCCAGTGTTTTTCTTGAGATCGAGGAACTCGAAGACGTCGCCGTGCCACGGCTCGAGATA 1906
Query 23473 AACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTT 23532
|| || || || || |||| ||| || ||||| || || || || || || ||||||||
Sbjct 1905 AATTGCGAAAGCACCTGGTCGCTTGTTTCCGCCTTGGTCTACATAGCGAGCGGTGTTGTT 1846
Query 23533 GTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGA 23592
||| || | | ||| || || || ||||| || ||| ||| || | | ||
Sbjct 1845 GTAAACACGCAACATTGGAACAAGTCCGTTTGAGATCCCGTTGGTGCCGGCGATATACGT 1786
Query 23593 ACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCAT 23652
|| || || |||| ||| |||| || ||| || || || |||| || ||||
Sbjct 1785 TCCCTTGGCGCGAATACAGTGCACGTTGACACCGATACCGCCAGCCGACTTGCTGATCAA 1726
Query 23653 CGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAA 23712
|||||||||||||| || ||||| ||||| || || ||| || ||| | |||
Sbjct 1725 AGCGCATTGTTTCAGCGTATCGTAAATGCCGTCAATTGAGTCATCGGACATCGACAACAA 1666
Query 23713 GAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTG 23772
||||||||| || | |||| ||||||||||| | ||| || || || ||| ||
Sbjct 1665 GAAACACGACGAAAGCTGCGGGCGAGGCGTAGCGGCGGCGAAGAGAGTTGGCGAGGCATG 1606
Query 23773 CGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCC 23832
|| ||||| | | |||| || ||||| || || ||||| | || ||||| || ||
Sbjct 1605 GGTGAAGTAGCGTTCAGACAAAAGGTTGTAAGTCTCAATGGCCGAGTCGATGTCTTCACC 1546
Query 23833 GTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTT 23892
|| || || | ||| || | ||| | ||||| ||| || | |||| | | ||| ||
Sbjct 1545 ATGGATGCCCACGGCAACTCTCATGAGCATGTGTTGCGGGCGCTCGGCGATCTTGCCTTT 1486
Query 23893 AATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTC 23952
| || | || || || | || || || ||||| || || | ||| |||||
Sbjct 1485 GTTCTTCAGCAAGTAGCTGCGCTCCAAAGTCTTGAATCCGAAGTAATTGTAGCCGAAGTC 1426
Query 23953 ACGATCGTGCACTATGGCCGAATTCAAACGGTACGCATTGGCAGCGATGATGTTGTAATG 24012
|| |||| | ||||| || ||||| || | ||||| ||| || | || |||
Sbjct 1425 GCGGTCGTAGATGATGGCAGAGTTCAAGCGATCAGCATTCTTCATGATAATTTCGTGATG 1366
Query 24013 AAAATTCGATATCATCGGCGTTTTAACGCCGGTCTT-TGGA--TCGATCGC---TTCATA 24066
|| | |||||||||| | ||| ||||| || ||| || | | ||
Sbjct 1365 GAAGTCACTGATCATCGGCGCT----CGC--GTCTTCAAGAATTCGTTCTCCATGTTGTA 1312
Query 24067 CATATCGATAATGACATCGAAAAAAGAATCTTTAGTCTCCTTGTGCAAATTAGACACGGC 24126
|| ||| ||||||||| || | || || |||||||||| ||| ||||||||
Sbjct 1311 CAAGTCGTCCATGACATCGCTGAATTGTTTCTTGGTTTCCTTGTGCAGATTCGACACGGC 1252
Query 24127 CAATCTAGCCGCAAGCAACGAATAGTCGGAATGATCGATGGTCATGGCCGCTGCCGTCTC 24186
| | ||| || |||| | ||||||| ||| ||| ||||||| | || || |||||
Sbjct 1251 GATGCGAGCAGCGAGCACAGCGTAGTCGGCATGGTCGGTGGTCATCGTGGCAGCAGTCTC 1192
Query 24187 GGCGATTAGATTGTCCAATTCAGCGGTGGTCACGCCCGAATA 24228
|| || ||||| | ||| || || ||||| | |||
Sbjct 1191 AGCTGCCAGGTTGTCGAGCTCACATGTAGTGACGCCGGTATA 1150
>seq596
Length=46163
Score = 286 bits (316), Expect = 3e-72
Identities = 576/845 (68%), Gaps = 12/845 (1%)
Strand=Plus/Minus
Query 57589 AGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATT 57648
|||| ||||| || |||||||| || |||||||| || |||| ||||| ||| ||| |
Sbjct 3313 AGGCTGAAGCTTCATTTTGGACAGTGGAAGAAGTCGATTTGTCAAAGGACATGAACGACT 3254
Query 57649 GGGATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCG 57708
|| | | | || || | ||| | ||||||| || || |||| || ||||| |
Sbjct 3253 GGAACAACTTGAAGGACACCGAGCGTCATTTTATCTCCCATGTTCTGGCCTTCTTCGCAG 3194
Query 57709 CATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGA 57768
| ||||| || || ||||||||||| | || ||| | || || ||||||||||| |
Sbjct 3193 CTTCCGACGGCATCGTTAACGAGAACCTCGTTGAACGGTTCAGCCAGGAAGTGCAAGTCA 3134
Query 57769 CGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGT 57828
| ||||| | ||||| || || || || | ||||| ||||| || || || || ||||
Sbjct 3133 CAGAGGCCCGTTGCTTCTATGGCTTCCAGATCGCCATGGAAAATGTCCACTCCGAGATGT 3074
Query 57829 ATTCGCTACTCATCGATACGTACGTGAAGGAC--AACGACGAGAAACGTAGACTGTTCAA 57886
| ||||| ||||| || || ||| | | ||| || | | | || | || |||||
Sbjct 3073 ACTCGCTTCTCATTGAAACCTACATTAGAGACTCAAAGGAGCGCGACTTC--CTTTTCAA 3016
Query 57887 CGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAA 57946
||| |||| | | || | || ||||| || ||| | | | |||||
Sbjct 3015 CGCCGTCGAGAATCTACCGTGTGTAAAGAAAAAGGCTGACTGGGCCTTGGACTGGATCGC 2956
Query 57947 AAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATT 58006
||| | | ||| | || | || | | ||||| || || || |||||||| || ||
Sbjct 2955 CAGCACAAAGGCTAACTTTGGAGAACGCATTATCGCCTTTGCTGCTGTCGAAGGAATTTT 2896
Query 58007 CTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCT 58066
||| || |||||||| |||| || ||| | ||||| ||||| ||||||| || ||
Sbjct 2895 CTTCAGCGGAAGCTTTGCCTCAATCTTCTGGCTCAAGAAGCGCGGTTTGATGCCAGGTCT 2836
Query 58067 GACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCT 58126
|| || ||||| | || || || |||||||| | || ||| ||||| |||||
Sbjct 2835 CACCTTCTCAAACGAACTCATCTCACGTGACGAGGGCTTGCACTGTGACTTTGCTTGCCT 2776
Query 58127 AATGTACTCTCACATTGTCAATAAACCGACGCGGGATCGCATCTTGGACATTATCACCGA 58186
|||| | || ||| | || || | ||| ||| | | || || ||| | ||
Sbjct 2775 GATGTTCAGACATCTTGAACAGAAGCCACCAAAGGAACGCGTTATCGAGATCATCTCAGA 2716
Query 58187 GGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTAT 58246
||| || ||| ||| | |||||| | ||||| ||||| ||| | ||||||||| ||
Sbjct 2715 GGCTGTAAAGATTGAACAAGAGTTTCTGACCGACGCCCTTCCGTGCGACATGCTCGGCAT 2656
Query 58247 GAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACT 58306
|||| | | ||||| | ||||| ||||| || ||||| | ||| || ||| ||
Sbjct 2655 GAACTGCGGACTAATGTCTGAATACATCGAGTTCGTGGCCGATCGTCTTCTGTCCGAGCT 2596
Query 58307 --GA-TTGGAGAGCGTCATTACAACACGAAAAATCCGTTTGATTTTATG-AATCTGATCT 58362
|| ||||| || || ||||| || |||||||| || || ||| |||| |||||
Sbjct 2595 TGGAGTTGGAAAGA-TC--TACAATACCAAAAATCCCTTCTCCTTCATGGAATC-GATCT 2540
Query 58363 CGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAAATACGGCG 58422
|||||||||| ||||| || || ||||| || ||||| | ||||| ||||| | ||| |
Sbjct 2539 CGCTCGAGGGAAAGACGAATTTCTTCGAGAAGAAAGTGGGAGAATACCAAAAGTCCGGTG 2480
Query 58423 TGATG 58427
|||||
Sbjct 2479 TGATG 2475
>seq29
Length=258594
Score = 134 bits (148), Expect = 1e-26
Identities = 176/241 (73%), Gaps = 6/241 (2%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
||||||||| ||||| || || |||| || ||||| || ||| |||| ||||| || ||
Sbjct 96422 CATGCAAATCTTCGTCAAAACATTGACGGGTAAAACCATTACCCTCGAGGTTGAGCCATC 96481
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| | |||||| ||||| | || |||||| |||||| | || || |||||
Sbjct 96482 GGACACTATCGAAAATGTCAAGGCCAAGATCCAGGACAAAGAAGGCATTCCCCCAGACCA 96541
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370
|||||| | || ||||| || || || |||||||| | | | ||| ||||||| || |
Sbjct 96542 GCAGCGATTGATCTTCGCCGGAAAGCAATTGGAAGA-TGGACGTACTCTGAGCGACTACA 96600
Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT----AGAAGC 31426
|||| ||||| || ||||| ||||| |||| || | ||| | || ||| ||||||
Sbjct 96601 ACATCCAAAAGGAGTCGACACTTCACTTGGTCCTCCGTCTGCGTGGTGGTGCCAAGAAGC 96660
Query 31427 G 31427
|
Sbjct 96661 G 96661
>seq108
Length=162490
Score = 131 bits (144), Expect = 1e-25
Identities = 158/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| |||||||| ||||| || || || || ||||| || |||||| |||| || || ||
Sbjct 112066 AAGATGCAAATCTTCGTGAAAACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGCCA 112007
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| |||| | |||| ||||| | || |||||||||||| | || || ||
Sbjct 112006 TCGGACACAATTGAAAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATTCCTCCAGAT 111947
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
||||||||||| || ||||||||||| ||| | |||||| | || ||||||| ||
Sbjct 111946 CAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTTGAAGACGGTCGCACATTGAGCGACTAC 111887
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|||||||| || || ||||| ||||| |||| ||
Sbjct 111886 AACATTCAGAAGGAGTCGACACTTCACTTGGTTCT 111852
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445738556316240
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