Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq1280 643 1e-179 seq596 286 3e-72 seq29 134 1e-26 seq108 131 1e-25 >seq1280 Length=9399 Score = 643 bits (712), Expect = 1e-179 Identities = 1436/2142 (67%), Gaps = 36/2142 (2%) Strand=Plus/Minus Query 22105 CTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCC 22164 |||||| ||||| ||||| || ||||| || || || |||||||| | ||| ||||| || Sbjct 3273 CTTGTCGACTGTGAACTGAATTGCGTTGGCAGCTGGCTTGGTGCGCAAATAGTACATTCC 3214 Query 22165 CGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGG 22224 ||||||| ||||| ||||| ||| || || || ||||||| |||||| || | || Sbjct 3213 GGTCTTCAAGCCCATTTTCCAGCCGTGGAAGTGAATTGACGTCAGTTTTCCGTAGTTTGG 3154 Query 22225 CAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGC 22284 | | | | || ||| ||||| ||||| ||||||||| ||||| || |||||||| || Sbjct 3153 CTCGGCGACGTGCACGTTGAATGACTGCGACTGATCGATGAACGCACCGCGATCGGCTGC 3094 Query 22285 CATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTC 22344 ||| | ||| || | ||||| ||||| ||||||||||||| | | ||| || Sbjct 3093 CATCTGGATCTGCGTCTTGACTGACATCTCCCAGACGGTCTTGTACAACTCGCGGATGTC 3034 Query 22345 TAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAAT 22404 || ||| ||||| |||| || || ||||| | |||||| || || || Sbjct 3033 GGCGGGGATCTTCTCGATGTTCTGAACTGATCCGTTGCTAGCGATGATCTCGTTCTTCAT 2974 Query 22405 CGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTG 22464 |||| ||| | | | |||| | ||| |||| ||||| | || || | || Sbjct 2973 GTCGTCGTCCCAGAGATCTCGTTCGGTGAGATCCTTGATGAGATGGTGATTGACGATCTG 2914 Query 22465 AAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTC 22524 ||| || ||| || |||||| | ||| | |||| ||| |||| ||||| ||| Sbjct 2913 AAATTCTCCGCTCAGCGTGCGGCGGTTGTAGACGTTGCTGGTGTACGGCTCGAAGCTTTC 2854 Query 22525 ATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTT 22584 ||||| || || ||||| || |||||||| |||||||| || || | || || || || Sbjct 2853 GTTGTTGCCGAGAATCTGTGCAGTCGAAGCAGTCGGCATTGGAGCGAGGAGAAGTGAATT 2794 Query 22585 TCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGACGG 22644 | || ||||||| | || ||| ||| || | | ||||||||||| | || || Sbjct 2793 GCGCACTCCGTGCTCGGCGATCTTAGCCTTCAGGACAGCCCAGTCCCACAAGTTGGTTGG 2734 Query 22645 CGTCACATTGTCCCACATATCGTATTGCAACACGCCG--CGACTCGCCGGGCTGCCTTCG 22702 ||| || |||||||| ||||| ||||| | || |||| | ||| |||||| Sbjct 2733 TGTC---TTTTCCCACATGTCGTACTGCAAGATTCCTTTCGACAC--CGGCGATCCTTCG 2679 Query 22703 TACGTTTCGTACGGACCATATATCGC-GGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTA 22761 || |||||||| | ||| | || | ||| ||||| || || ||||| | ||||||||| Sbjct 2678 TAGGTTTCGTAAGTACCG-AGCTCTCTGGCGAGTTCACAACTTGCCTCAAGCGCGCCGTA 2620 Query 22762 ATATATAGTCTCGAAGATTTTCTTGTTCAA-TTCGGCGGC---GGCGACGCTTTCGTACG 22817 || || ||||||||||| | || ||||| ||| | | |||||| ||| ||| Sbjct 2619 GTAGATCGTCTCGAAGATCTGCTGGTTCAGCTTCTGTGCGTTTGGCGAC----TCGAACG 2564 Query 22818 GCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGT 22877 | || |||| | | ||| ||||| |||| || |||| ||| ||||||||||| || | Sbjct 2563 GATAACTCATCGTGATGAAAGCGTCGGCCAGGCCTTGAATGCCGATACCGATCGGGCGAT 2504 Query 22878 TTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGT 22937 || ||||| || ||||| || | || || | || |||||| | ||| Sbjct 2503 GACGCATGTTCGATCGCTTAGCCTCTGGGATCGGGTAGTAGTTGACATCGATGATCTTGT 2444 Query 22938 TCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAAC---GC 22994 ||||||| | || ||| | || || | | ||||||||| | Sbjct 2443 TCAAGTTCTTTGTGACAGTCTTGGTGACTTCCTTGAGCTTTTGGAAGTCGTAAGTCTTGG 2384 Query 22995 CCGATT-GTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCG 23053 | ||| || || ||||| ||||||| |||||||| || |||||||| ||||| || ||| Sbjct 2383 CTGATGCGTTCA-CAAACATGTTGACAGCGATCGATGCCAGATTGCAGACGGCGACTTCG 2325 Query 23054 TCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAA 23113 || ||| | ||||| | ||||| || || | ||| || || ||||| | Sbjct 2324 TCCTTGCTGGAATACTCGATGATTTCCGTGCACAAGTTGGAGCAACGAATGGTGCCGACG 2265 Query 23114 TTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTC 23173 || |||||| ||||| ||||| | |||||||| | |||||| |||||||| ||| Sbjct 2264 TTCTGCTGGTTCGACTTTCGGTTGCAAGCGTCCTTGTACAACATGTAAGGCGTGCCAGTC 2205 Query 23174 TCGACCTGCGACTCGATGATCGCTCGCCACATAGTCT-GAGCGTGAACACGTCGCACGTA 23232 ||||| || ||||||||||| || ||||| ||||| |||| | | | || | ||| Sbjct 2204 TCGACTTGTGACTCGATGATGGCAAACCACA-AGTCTTGAGCCTTGATCTGGCGGAGGTA 2146 Query 23233 CCTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGC 23292 | |||||| | ||||| | | ||||||| || || || | || | ||||| Sbjct 2145 ACGGCCTTCGGCTTCGTATCTCTCGTACAACTTCTCGAACTCTTCGCCCCACGAGTCGTA 2086 Query 23293 CAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCT 23352 ||||| || | ||||||||| | ||| | | || |||||||||| | Sbjct 2085 GAGGCCTGGACAGCTGTGCGGACACATCAACGACCAGACTCCGTTGCTTTCAACGCGACG 2026 Query 23353 CATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTT 23412 ||| || | ||| || ||||| | ||||||||||| || || || || || || ||||| Sbjct 2025 CATGAACAAATCGGGAATCCACAAAGCGTAGAACATGTCACGAGCACGAACTTCTTCTTT 1966 Query 23413 GCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTA 23472 ||| ||||| || || | ||| | || || || ||||| | |||||||||||||| || Sbjct 1965 GCCAGTGTTTTTCTTGAGATCGAGGAACTCGAAGACGTCGCCGTGCCACGGCTCGAGATA 1906 Query 23473 AACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTT 23532 || || || || || |||| ||| || ||||| || || || || || || |||||||| Sbjct 1905 AATTGCGAAAGCACCTGGTCGCTTGTTTCCGCCTTGGTCTACATAGCGAGCGGTGTTGTT 1846 Query 23533 GTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGA 23592 ||| || | | ||| || || || ||||| || ||| ||| || | | || Sbjct 1845 GTAAACACGCAACATTGGAACAAGTCCGTTTGAGATCCCGTTGGTGCCGGCGATATACGT 1786 Query 23593 ACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCAT 23652 || || || |||| ||| |||| || ||| || || || |||| || |||| Sbjct 1785 TCCCTTGGCGCGAATACAGTGCACGTTGACACCGATACCGCCAGCCGACTTGCTGATCAA 1726 Query 23653 CGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAA 23712 |||||||||||||| || ||||| ||||| || || ||| || ||| | ||| Sbjct 1725 AGCGCATTGTTTCAGCGTATCGTAAATGCCGTCAATTGAGTCATCGGACATCGACAACAA 1666 Query 23713 GAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTG 23772 ||||||||| || | |||| ||||||||||| | ||| || || || ||| || Sbjct 1665 GAAACACGACGAAAGCTGCGGGCGAGGCGTAGCGGCGGCGAAGAGAGTTGGCGAGGCATG 1606 Query 23773 CGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCC 23832 || ||||| | | |||| || ||||| || || ||||| | || ||||| || || Sbjct 1605 GGTGAAGTAGCGTTCAGACAAAAGGTTGTAAGTCTCAATGGCCGAGTCGATGTCTTCACC 1546 Query 23833 GTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTT 23892 || || || | ||| || | ||| | ||||| ||| || | |||| | | ||| || Sbjct 1545 ATGGATGCCCACGGCAACTCTCATGAGCATGTGTTGCGGGCGCTCGGCGATCTTGCCTTT 1486 Query 23893 AATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTC 23952 | || | || || || | || || || ||||| || || | ||| ||||| Sbjct 1485 GTTCTTCAGCAAGTAGCTGCGCTCCAAAGTCTTGAATCCGAAGTAATTGTAGCCGAAGTC 1426 Query 23953 ACGATCGTGCACTATGGCCGAATTCAAACGGTACGCATTGGCAGCGATGATGTTGTAATG 24012 || |||| | ||||| || ||||| || | ||||| ||| || | || ||| Sbjct 1425 GCGGTCGTAGATGATGGCAGAGTTCAAGCGATCAGCATTCTTCATGATAATTTCGTGATG 1366 Query 24013 AAAATTCGATATCATCGGCGTTTTAACGCCGGTCTT-TGGA--TCGATCGC---TTCATA 24066 || | |||||||||| | ||| ||||| || ||| || | | || Sbjct 1365 GAAGTCACTGATCATCGGCGCT----CGC--GTCTTCAAGAATTCGTTCTCCATGTTGTA 1312 Query 24067 CATATCGATAATGACATCGAAAAAAGAATCTTTAGTCTCCTTGTGCAAATTAGACACGGC 24126 || ||| ||||||||| || | || || |||||||||| ||| |||||||| Sbjct 1311 CAAGTCGTCCATGACATCGCTGAATTGTTTCTTGGTTTCCTTGTGCAGATTCGACACGGC 1252 Query 24127 CAATCTAGCCGCAAGCAACGAATAGTCGGAATGATCGATGGTCATGGCCGCTGCCGTCTC 24186 | | ||| || |||| | ||||||| ||| ||| ||||||| | || || ||||| Sbjct 1251 GATGCGAGCAGCGAGCACAGCGTAGTCGGCATGGTCGGTGGTCATCGTGGCAGCAGTCTC 1192 Query 24187 GGCGATTAGATTGTCCAATTCAGCGGTGGTCACGCCCGAATA 24228 || || ||||| | ||| || || ||||| | ||| Sbjct 1191 AGCTGCCAGGTTGTCGAGCTCACATGTAGTGACGCCGGTATA 1150 >seq596 Length=46163 Score = 286 bits (316), Expect = 3e-72 Identities = 576/845 (68%), Gaps = 12/845 (1%) Strand=Plus/Minus Query 57589 AGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATT 57648 |||| ||||| || |||||||| || |||||||| || |||| ||||| ||| ||| | Sbjct 3313 AGGCTGAAGCTTCATTTTGGACAGTGGAAGAAGTCGATTTGTCAAAGGACATGAACGACT 3254 Query 57649 GGGATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCG 57708 || | | | || || | ||| | ||||||| || || |||| || ||||| | Sbjct 3253 GGAACAACTTGAAGGACACCGAGCGTCATTTTATCTCCCATGTTCTGGCCTTCTTCGCAG 3194 Query 57709 CATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGA 57768 | ||||| || || ||||||||||| | || ||| | || || ||||||||||| | Sbjct 3193 CTTCCGACGGCATCGTTAACGAGAACCTCGTTGAACGGTTCAGCCAGGAAGTGCAAGTCA 3134 Query 57769 CGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGT 57828 | ||||| | ||||| || || || || | ||||| ||||| || || || || |||| Sbjct 3133 CAGAGGCCCGTTGCTTCTATGGCTTCCAGATCGCCATGGAAAATGTCCACTCCGAGATGT 3074 Query 57829 ATTCGCTACTCATCGATACGTACGTGAAGGAC--AACGACGAGAAACGTAGACTGTTCAA 57886 | ||||| ||||| || || ||| | | ||| || | | | || | || ||||| Sbjct 3073 ACTCGCTTCTCATTGAAACCTACATTAGAGACTCAAAGGAGCGCGACTTC--CTTTTCAA 3016 Query 57887 CGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAA 57946 ||| |||| | | || | || ||||| || ||| | | | ||||| Sbjct 3015 CGCCGTCGAGAATCTACCGTGTGTAAAGAAAAAGGCTGACTGGGCCTTGGACTGGATCGC 2956 Query 57947 AAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATT 58006 ||| | | ||| | || | || | | ||||| || || || |||||||| || || Sbjct 2955 CAGCACAAAGGCTAACTTTGGAGAACGCATTATCGCCTTTGCTGCTGTCGAAGGAATTTT 2896 Query 58007 CTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCT 58066 ||| || |||||||| |||| || ||| | ||||| ||||| ||||||| || || Sbjct 2895 CTTCAGCGGAAGCTTTGCCTCAATCTTCTGGCTCAAGAAGCGCGGTTTGATGCCAGGTCT 2836 Query 58067 GACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCT 58126 || || ||||| | || || || |||||||| | || ||| ||||| ||||| Sbjct 2835 CACCTTCTCAAACGAACTCATCTCACGTGACGAGGGCTTGCACTGTGACTTTGCTTGCCT 2776 Query 58127 AATGTACTCTCACATTGTCAATAAACCGACGCGGGATCGCATCTTGGACATTATCACCGA 58186 |||| | || ||| | || || | ||| ||| | | || || ||| | || Sbjct 2775 GATGTTCAGACATCTTGAACAGAAGCCACCAAAGGAACGCGTTATCGAGATCATCTCAGA 2716 Query 58187 GGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTAT 58246 ||| || ||| ||| | |||||| | ||||| ||||| ||| | ||||||||| || Sbjct 2715 GGCTGTAAAGATTGAACAAGAGTTTCTGACCGACGCCCTTCCGTGCGACATGCTCGGCAT 2656 Query 58247 GAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACT 58306 |||| | | ||||| | ||||| ||||| || ||||| | ||| || ||| || Sbjct 2655 GAACTGCGGACTAATGTCTGAATACATCGAGTTCGTGGCCGATCGTCTTCTGTCCGAGCT 2596 Query 58307 --GA-TTGGAGAGCGTCATTACAACACGAAAAATCCGTTTGATTTTATG-AATCTGATCT 58362 || ||||| || || ||||| || |||||||| || || ||| |||| ||||| Sbjct 2595 TGGAGTTGGAAAGA-TC--TACAATACCAAAAATCCCTTCTCCTTCATGGAATC-GATCT 2540 Query 58363 CGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAAATACGGCG 58422 |||||||||| ||||| || || ||||| || ||||| | ||||| ||||| | ||| | Sbjct 2539 CGCTCGAGGGAAAGACGAATTTCTTCGAGAAGAAAGTGGGAGAATACCAAAAGTCCGGTG 2480 Query 58423 TGATG 58427 ||||| Sbjct 2479 TGATG 2475 >seq29 Length=258594 Score = 134 bits (148), Expect = 1e-26 Identities = 176/241 (73%), Gaps = 6/241 (2%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| ||||| || || |||| || ||||| || ||| |||| ||||| || || Sbjct 96422 CATGCAAATCTTCGTCAAAACATTGACGGGTAAAACCATTACCCTCGAGGTTGAGCCATC 96481 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | |||||| ||||| | || |||||| |||||| | || || ||||| Sbjct 96482 GGACACTATCGAAAATGTCAAGGCCAAGATCCAGGACAAAGAAGGCATTCCCCCAGACCA 96541 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370 |||||| | || ||||| || || || |||||||| | | | ||| ||||||| || | Sbjct 96542 GCAGCGATTGATCTTCGCCGGAAAGCAATTGGAAGA-TGGACGTACTCTGAGCGACTACA 96600 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT----AGAAGC 31426 |||| ||||| || ||||| ||||| |||| || | ||| | || ||| |||||| Sbjct 96601 ACATCCAAAAGGAGTCGACACTTCACTTGGTCCTCCGTCTGCGTGGTGGTGCCAAGAAGC 96660 Query 31427 G 31427 | Sbjct 96661 G 96661 >seq108 Length=162490 Score = 131 bits (144), Expect = 1e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || |||||||| ||||| || || || || ||||| || |||||| |||| || || || Sbjct 112066 AAGATGCAAATCTTCGTGAAAACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGCCA 112007 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || |||| | |||| ||||| | || |||||||||||| | || || || Sbjct 112006 TCGGACACAATTGAAAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATTCCTCCAGAT 111947 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 ||||||||||| || ||||||||||| ||| | |||||| | || ||||||| || Sbjct 111946 CAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTTGAAGACGGTCGCACATTGAGCGACTAC 111887 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||||||| || || ||||| ||||| |||| || Sbjct 111886 AACATTCAGAAGGAGTCGACACTTCACTTGGTTCT 111852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445738556316240