Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq596 118 2e-21 >seq596 Length=46163 Score = 118 bits (130), Expect = 2e-21 Identities = 297/448 (66%), Gaps = 5/448 (1%) Strand=Plus/Minus Query 101909 GAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCC 101968 |||| ||| | ||||||||||| || |||||||| ||||| || || || || || Sbjct 2933 GAACGCATTATCGCCTTTGCTGCTGTCGAAGGAATTTTCTTCAGCGGAAGCTTTGCCTCA 2874 Query 101969 ATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATT 102028 || |||||| ||||||| | ||| | |||| |||||||||| ||| || || |||| Sbjct 2873 ATCTTCTGGCTCAAGAAGCGCGGTTTGATGCCAGGTCTCACCTTCTCAAACGAACTCATC 2814 Query 102029 TCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTT 102088 || | ||||| || | || | |||||||| ||| || |||| | | | | ||| Sbjct 2813 TCACGTGACGAGGGCTTGCACTGTGACTTTGCTTGCCTGATGTTCAGACA---TCTTGAA 2757 Query 102089 GATACCCCATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAA 102148 | | ||| ||| ||| | || | || || || | || || || ||||||||| Sbjct 2756 CAGAAGCCACCAAAGGAACGCGTTATCGAGATCATCTCAGAGGCTGTAAAGATTGAACAA 2697 Query 102149 GAATTTCTCACAGTTTCCCTGCC-TGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAG 102207 || ||||| || | |||| || || | | | | || ||||||||| | ||| Sbjct 2696 GAGTTTCTGACCGACGCCCTTCCGTGCGACA-TGCTCGGCATGAACTGCGGACTAATGTC 2638 Query 102208 CCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTA 102267 | ||||| || || ||||| ||| || || || | ||| | | |||| ||| Sbjct 2637 TGAATACATCGAGTTCGTGGCCGATCGTCTTCTGTCCGAGCTTGGAGTTGGAAAGATCTA 2578 Query 102268 TAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTT 102327 ||| | || |||||| | |||||||| || || |||||| ||||| || || Sbjct 2577 CAATACCAAAAATCCCTTCTCCTTCATGGAATCGATCTCGCTCGAGGGAAAGACGAATTT 2518 Query 102328 TTTTGAAAAGAGAGTCGCCGAGTATCAA 102355 || || |||| ||| | || || ||| Sbjct 2517 CTTCGAGAAGAAAGTGGGAGAATACCAA 2490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989520642812135