Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq1280 203 4e-47
seq596 201 1e-46
>seq1280
Length=9399
Score = 203 bits (224), Expect = 4e-47
Identities = 806/1254 (64%), Gaps = 32/1254 (3%)
Strand=Plus/Minus
Query 62655 GCTAGTTTACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTT 62714
|| |||| |||||| ||||| | || ||||| || || || || ||||||| || ||
Sbjct 2651 GCGAGTTCACAACTTGCCTCAAGCGCGCCGTAGTAGATCGTCTCGAAGATCTGCTGGTTC 2592
Query 62715 AGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAAT 62774
|| | ||||| | || || || |||||| | | || || ||||| || |
Sbjct 2591 AGCTTCTGTGCGTTTGGCGACTCGAACGGATAACTCATCGTGATGAAAGCGTCGGCCAGG 2532
Query 62775 CCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATA 62834
||||||| || |||||||| || | ||| | | | || || | ||| ||||| ||
Sbjct 2531 CCTTGAATGCCGATACCGATCGGGCGATGACGCATGTTCGATCGCTTAGCCTCTGGGATC 2472
Query 62835 GGATAATAATTAATATCTATAATTTTATTGAGATT---TCTGACAATTACTTTGACCACA 62891
|| || || || | ||| || || || || | || | ||||| | ||| ||
Sbjct 2471 GGGTAGTAGTTGACATCGATGATCTTGTTCAAGTTCTTTGTGACAGTC---TTGGTGACT 2415
Query 62892 TCCTTCAGTTTGAGAAAATC--AAATC---GCCCATCTATT-ACAAACATGTTCAATGCA 62945
||||| || || | || || || || || || || ||||||||||| | ||
Sbjct 2414 TCCTTGAGCTTTTGGAAGTCGTAAGTCTTGGCTGATGCGTTCACAAACATGTTGACAGCG 2355
Query 62946 ACAGATGCCAGATTACACACGGCTACCTCATTAGCATCC--GCATATTGTATTATCTCAG 63003
| ||||||||||| || ||||| || || | | | | | ||| | || || || |
Sbjct 2354 ATCGATGCCAGATTGCAGACGGCGACTTCGTC--CTTGCTGGAATACTCGATGATTTCCG 2297
Query 63004 TGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACG 63063
|||| | || || || || || | || || || || |||| ||| || |
Sbjct 2296 TGCACAAGTTGGAGCAACGAATGGTGCCGACGTTCTGCTGGTTCGACTTTCGGTTGCAAG 2237
Query 63064 CATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCC 63123
| ||||| || | ||| | || || ||||| || | || || || || || || ||
Sbjct 2236 CGTCCTTGTACAACATGTAAGGCGTGCCAGTCTCGACTTGTGACTCGATGATGGCAAACC 2177
Query 63124 AGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCTCTTTCGTATAGAGTATACA 63183
| | | || ||||||| || ||| | | ||| ||||||| ||||
Sbjct 2176 ACAAGTCTTGAGCCTTGATCTGGCGGAGGTAACGGCCTTCGGCTTCGTATCTCTCGTACA 2117
Query 63184 ATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCA 63243
| |||||||| || ||||| | || | | ||||| | |||||||||||
Sbjct 2116 ACTTCTCGAACTCTTCGCCCCACGAGTCGTAGAGGCCTGGACAGCTGTGCGGACACATCA 2057
Query 63244 ACGACCACTCTCCGTCATCCTTCA-CTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCT 63302
||||||| |||||| | |||| | || ||| || | ||| |||||||| | |||
Sbjct 2056 ACGACCAGACTCCGTTG-CTTTCAACGCGACGCATGAACAAATCGGGAATCCACAAAGCG 1998
Query 63303 ATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAAC 63362
|| | || | | | | ||| || || || || || || || ||||||||||||
Sbjct 1997 TAGAACATGTCACGAGCACGAACTTCTTCTTTGCCAGTGTTTTTCTTGAGATCGAGGAAC 1938
Query 63363 GCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTT 63422
| | | || |||||||| || | || || || | | | || || || ||||||
Sbjct 1937 TCGAAGACGTCGCCGTGCCACGGCTCGAGATAAATTGCGAAAGCACCTGGTCGCTTGTTT 1878
Query 63423 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCG 63482
|| || || |||| || | ||||||||| || ||||| | ||||||||||| || |||
Sbjct 1877 CCGCCTTGGTCTACATAGCGAGCGGTGTTGTTGTAAACACGCAACATTGGAACAAGTCCG 1818
Query 63483 TTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAAT--ATTACTAATTG 63540
||||| || || ||||| |||| |||||| ||| |||| ||||| | | | |||
Sbjct 1817 TTTGAGATCCCGTTGGTGCCGGCGATATACGTTCCCTTGGCGCGAATACAGTGCACGTTG 1758
Query 63541 ATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGA 63600
| ||| || || || ||| || ||| || |||||| |||| | ||| || || |
Sbjct 1757 --ACACCGATACCGCCAGCCGACTTGCTGATCAAAGCGCATTGTTTCAGCGTATCGTAAA 1700
Query 63601 TGCCTTCTATGCTATCATCGATCAT-GTTAAGTAGAAAACAGCTAGACATTTGGTGACGA 63659
|||| || || |||||| ||| | || || ||||| || | || | |||
Sbjct 1699 TGCCGTCAATTGAGTCATCGGACATCGACAACAAG-AAACACGACGAAAGCTGCGGGCGA 1641
Query 63660 GTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGA 63719
| || | || || | || || || || || || || | |||||| | ||
Sbjct 1640 GGCGTAGCGGCGGCGAAGAGAGTTGGCGAGGCATGGGTGAAGTAGCGTTCAGACAAAAGG 1581
Query 63720 TTGTACGTCTCAATAGCTGAGTCTATATC----CCATTGATGAATTCCTACTGCGACACG 63775
||||| |||||||| || ||||| || || |||| |||| || || || || |
Sbjct 1580 TTGTAAGTCTCAATGGCCGAGTCGATGTCTTCACCATGGATG----CCCACGGCAACTCT 1525
Query 63776 CATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTT 63835
||| | |||||| || || | || | || ||| || | |||| |||||||
Sbjct 1524 CATGAGCATGTGTTGCGGGCGCTCGGCGATCTTGCCTTTGTTCTTCAGCAAGTAGCTGCG 1465
Query 63836 TTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 63889
|||||||| || || || || || ||||| ||||| || ||||| || ||
Sbjct 1464 CTCCAAAGTCTTGAATCCGAAGTAATTGTAGCCGAAGTCGCGGTCGTAGATGAT 1411
>seq596
Length=46163
Score = 201 bits (222), Expect = 1e-46
Identities = 550/834 (66%), Gaps = 19/834 (2%)
Strand=Plus/Plus
Query 33291 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33350
||||||||||| ||||| || ||||| ||||| || ||||| || | || || |
Sbjct 2488 TTTTGGTATTCTCCCACTTTCTTCTCGAAGAAATTCGTCTTTCCCTCGAGCGAGATCGAT 2547
Query 33351 TCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATC 33410
|||||||| || ||||| | |||||| || ||| || ||| | || || |
Sbjct 2548 TCCATGAAGGAGAAGGGATTTTTGGTATTGTAGATCTTTCCAACTCCAAGCTCGGACAGA 2607
Query 33411 AATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGA-G 33469
| | ||| || ||||| || || ||| ||| | | | || ||||| || | | |
Sbjct 2608 AGACGATCGGCCACGAACTCGATGTATTCAGACATTAGTCCGCAGTTCATGCCGAGCATG 2667
Query 33470 TTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAAT 33529
| || ||||| || | || ||||| ||||||||||| ||| || | || || ||
Sbjct 2668 TCGCAC-GGAAGGGCGTCGGTCAGAAACTCTTGTTCAATCTTTACAGCCTCTGAGATGAT 2726
Query 33530 AAATCTAACGGTTTCTTCACTCGGTGGAT---GTAATAAATGTTTAAACATCAAACATGC 33586
||||| ||| | | ||||| | || | |||| | ||||||| || ||
Sbjct 2727 CTCGATAACGCGTTCCT---TTGGTGGCTTCTGTTCAAGATGTCTGAACATCAGGCAAGC 2783
Query 33587 GAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGG 33646
|| || ||||||| |||||||| | || | |||||| || || ||||| || ||
Sbjct 2784 AAAGTCACAGTGCAAGCCCTCGTCACGTGAGATGAGTTCGTTTGAGAAGGTGAGACCTGG 2843
Query 33647 CATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCC 33706
||| | || ||||| || ||||| || || || || || |||| ||||| |||||
Sbjct 2844 CATCAAACCGCGCTTCTTGAGCCAGAAGATTGAGGCAAAGCTTCCGCTGAAGAAAATTCC 2903
Query 33707 TTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCA----TAACC--GGCGCTGTCATGTAT 33760
||| || ||||||||||| |||| | |||||| || || | |||| | ||
Sbjct 2904 TTCGACAGCAGCAAAGGCGATAATGCGTTCTCCAAAGTTAGCCTTTGTGCTGGC---GAT 2960
Query 33761 CCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAA 33820
||| | ||||| || ||||| || |||||||| || | | || | ||| || ||
Sbjct 2961 CCAGTCCAAGGCCCAGTCAGCCTTTTTCTTTACACACGGTAGATTCTCGACGGCGTTGAA 3020
Query 33821 GAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTC 33880
|| ||| || || ||| ||| || || || || | ||| ||||| ||
Sbjct 3021 AAGGAAGTCGCGCTCCTTTGAGTCTCTAATGTAGGTTTCAATGAGAAGCGAGTACATCTC 3080
Query 33881 CGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTG 33940
|| || | ||||| ||||| ||||| || || ||||| || | ||||| || | ||
Sbjct 3081 GGAGTGGACATTTTCCATGGCGATCTGGAAGCCATAGAAGCAACGGGCCTCTGTGACTTG 3140
Query 33941 CACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAA 34000
|||||| | || ||||| | | || || || || || || || ||||| ||
Sbjct 3141 CACTTCCTGGCTGAACCGTTCAACGAGGTTCTCGTTAACGATGCCGTCGGAAGCTGCGAA 3200
Query 34001 AAACGCCAATACATGTTTTATAAAAT-ATTTTTCGTCTGGTGTTAGTTTATTCCAATCAT 34059
|| |||| ||||| ||||||| | | || | | | | || ||||| || |
Sbjct 3201 GAAGGCCAGAACATGGGAGATAAAATGACGCTCGGTGTCCT-TCAAGTTGTTCCAGTCGT 3259
Query 34060 TGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 34113
| || || || || | ||| ||||||||||||||||||||||| || || ||||
Sbjct 3260 TCATGTCCTTTGACAAATCGACTTCTTCCACTGTCCAAAATGAAGCTTCAGCCT 3313
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629778260018160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |