Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq1280 219 6e-52 seq596 183 4e-41 >seq1280 Length=9399 Score = 219 bits (242), Expect = 6e-52 Identities = 983/1535 (64%), Gaps = 52/1535 (3%) Strand=Plus/Minus Query 65411 CGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAG-CTAGTTCACAACTCGCCTCTA 65469 ||||||| | || || ||||| | || || ||| | | ||||||||||| ||||| | Sbjct 2688 CGATCCTTCGTAGGTTTCGTAAGTACCGAGCT-CTCTGGCGAGTTCACAACTTGCCTCAA 2630 Query 65470 ATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTA- 65528 || ||||| || || || |||||||||| || || || | ||||| | ||| | Sbjct 2629 GCGCGCCGTAGTAGATCGTCTCGAAGATCTGCTGGTTCAGCTTCTGTGCGTTT-GGCGAC 2571 Query 65529 TCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATA 65588 || || |||||| | | || || ||||| || | ||||||| || |||||||| Sbjct 2570 TCGAACGGATAACTCATCGTGATGAAAGCGTCGGCCAGGCCTTGAATGCCGATACCGATC 2511 Query 65589 GGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATA 65648 || | ||| | | | || || | ||| ||||| || || || || || | ||| || Sbjct 2510 GGGCGATGACGCATGTTCGATCGCTTAGCCTCTGGGATCGGGTAGTAGTTGACATCGATG 2451 Query 65649 ATTTTATTGAGATT---TCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATC- 65704 || || || | || | ||||| | ||| || ||||| || || | || || Sbjct 2450 ATCTTGTTCAAGTTCTTTGTGACAGTC---TTGGTGACTTCCTTGAGCTTTTGGAAGTCG 2394 Query 65705 -AAATC---GCTCATCTATT-ACAAACATGTTCAATGCAACAGATGCCAGATTACAAACG 65759 || || ||| || || ||||||||||| | || | ||||||||||| || ||| Sbjct 2393 TAAGTCTTGGCTGATGCGTTCACAAACATGTTGACAGCGATCGATGCCAGATTGCAGACG 2334 Query 65760 GCTACCTCATTAGCATCC--GCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGA 65817 || || || | | | | | ||| | || || || ||||| | || || | Sbjct 2333 GCGACTTCGTC--CTTGCTGGAATACTCGATGATTTCCGTGCACAAGTTGGAGCAACGAA 2276 Query 65818 TGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATG 65877 |||| || | || || || || |||| ||| || || ||||| || | ||| | | Sbjct 2275 TGGTGCCGACGTTCTGCTGGTTCGACTTTCGGTTGCAAGCGTCCTTGTACAACATGTAAG 2216 Query 65878 GAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTA 65937 | || ||||| || | || || || || || || ||| | | || ||||||| || Sbjct 2215 GCGTGCCAGTCTCGACTTGTGACTCGATGATGGCAAACCACAAGTCTTGAGCCTTGATCT 2156 Query 65938 TAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCC 65997 ||| | ||| ||||||| ||||| |||||||| || |||| Sbjct 2155 GGCGGAGGTAACGGCCTTCGGCTTCGTATCTCTCGTACAACTTCTCGAACTCTTCGCCCC 2096 Query 65998 AAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCT 66057 | | || | || ||||| | |||||||||||||||||| |||||| | | Sbjct 2095 ACGAGTCGTAGAGGCCTGGACAGCTGTGCGGACACATCAACGACCAGACTCCGTTG-CTT 2037 Query 66058 TCA-CTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTA 66116 ||| | || ||| || | ||| |||||||| | ||| || | || | | | | Sbjct 2036 TCAACGCGACGCATGAACAAATCGGGAATCCACAAAGCGTAGAACATGTCACGAGCACGA 1977 Query 66117 TGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCAC 66176 ||| || || || || || || || |||||||||||| | | | || |||||| Sbjct 1976 ACTTCTTCTTTGCCAGTGTTTTTCTTGAGATCGAGGAACTCGAAGACGTCGCCGTGCCAC 1917 Query 66177 GGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTA 66236 || || | || || || | | | || || || |||||||| || || |||| || | | Sbjct 1916 GGCTCGAGATAAATTGCGAAAGCACCTGGTCGCTTGTTTCCGCCTTGGTCTACATAGCGA 1857 Query 66237 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCG 66296 |||||||| || ||||| | ||||||||||| || || || || | || ||||| ||| Sbjct 1856 GCGGTGTTGTTGTAAACACGCAACATTGGAACAAGTCCGTTTGAGATCCCGTTGGTGCCG 1797 Query 66297 GAGATATAGCTTCCACTTGCACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCCA 66354 | |||||| |||| | || ||||| | | | ||| | ||| || || || ||| Sbjct 1796 GCGATATACGTTCCCTTGGCGCGAATACAGTGCACGTTG--ACACCGATACCGCCAGCCG 1739 Query 66355 TTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCA 66414 || ||| || |||||| |||| | |||||| || ||||| || || ||||| Sbjct 1738 ACTTGCTGATCAAAGCGCATTGTTTCAGCGTATCGTAAATGCCGTCAATTGAGTCATCGG 1679 Query 66415 TCAT-GTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAG 66473 ||| | || || ||||| || | || | ||| || | || || | Sbjct 1678 ACATCGACAACAAG-AAACACGACGAAAGCTGCGGGCGAGGCGTAGCGGCGGCGAAGAGA 1620 Query 66474 GTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAG 66533 || || || || || || || | |||||| | || ||||| |||||||| || ||| Sbjct 1619 GTTGGCGAGGCATGGGTGAAGTAGCGTTCAGACAAAAGGTTGTAAGTCTCAATGGCCGAG 1560 Query 66534 TCTATATC----CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCT 66589 || || || |||| |||| || || || || | ||| | |||||| || || | Sbjct 1559 TCGATGTCTTCACCATGGATG----CCCACGGCAACTCTCATGAGCATGTGTTGCGGGCG 1504 Query 66590 TTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 66649 || |||||||| || | |||| ||||||| |||||||| || || || || Sbjct 1503 CTCGGCGATCTTGCCTTTGTTCTTCAGCAAGTAGCTGCGCTCCAAAGTCTTGAATCCGAA 1444 Query 66650 ATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT---GAGTTTATCCTTATA 66706 || ||||| ||||| || ||||| || || | ||||| | | | | | || | Sbjct 1443 GTAATTGTAGCCGAAGTCGCGGTCGTAGATGATGGCAGAGTTCAAGCGATCAGCATTCTT 1384 Query 66707 TTTGTTAACTACATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGG 66766 || ||| | | | |||| | | || || ||||| | || | | || | | Sbjct 1383 CATGATAATTTCGT-GATGGAAGTCACTG--ATCATCGGCG-----CTCGCGTCTTCAAG 1332 Query 66767 A-----TTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCT 66821 | || | |||| | || || ||||| || || || ||| |||| || ||||| Sbjct 1331 AATTCGTTCTCCATGTTGTACAAGTCGTCCATGACATCGCTGAATTGTTTCTTGGTTTCC 1272 Query 66822 TTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATGTTGTGTA 66881 ||||| ||||| || ||||| || | ||| || | | || || || | ||| | || Sbjct 1271 TTGTGCAGATTCGACACGGCGATGCGAGCAGCGAGCACAGCGTAGTCGGCATGGTCGGTG 1212 Query 66882 GTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTC 66916 || ||||| || | || |||||||| |||| Sbjct 1211 GTCATCGTGGCAGCAGTCTCAGCTGCCAGGTTGTC 1177 >seq596 Length=46163 Score = 183 bits (202), Expect = 4e-41 Identities = 545/834 (65%), Gaps = 19/834 (2%) Strand=Plus/Plus Query 35867 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 35926 ||||||||||| ||||| || ||||| ||||| || || || || | || || | Sbjct 2488 TTTTGGTATTCTCCCACTTTCTTCTCGAAGAAATTCGTCTTTCCCTCGAGCGAGATCGAT 2547 Query 35927 TCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAATC 35986 |||||||| ||| ||||| | ||| || || ||| || ||| | || || | Sbjct 2548 TCCATGAAGGAGAAGGGATTTTTGGTATTGTAGATCTTTCCAACTCCAAGCTCGGACAGA 2607 Query 35987 AATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAA-G 36045 | | ||| || || || || || ||| ||| | | | || ||||| || | | | Sbjct 2608 AGACGATCGGCCACGAACTCGATGTATTCAGACATTAGTCCGCAGTTCATGCCGAGCATG 2667 Query 36046 TTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 36105 | || ||||| || | || ||||| ||||||||||| || || |||| || || Sbjct 2668 TCGCAC-GGAAGGGCGTCGGTCAGAAACTCTTGTTCAATCTTTACAGCCTCTGAGATGAT 2726 Query 36106 AGATATTACTGTTTCTTCACTCGGTGGATACAAT---AAATGTTTAAACATCAAACATGC 36162 || || ||| | | ||||| | | | | |||| | ||||||| || || Sbjct 2727 CTCGATAACGCGTTCCT---TTGGTGGCTTCTGTTCAAGATGTCTGAACATCAGGCAAGC 2783 Query 36163 GAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGG 36222 || || ||||| | |||||||| | || | |||||| || || ||||| || || Sbjct 2784 AAAGTCACAGTGCAAGCCCTCGTCACGTGAGATGAGTTCGTTTGAGAAGGTGAGACCTGG 2843 Query 36223 CATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCC 36282 ||| | || ||||| || ||||| || || || ||||| ||| ||||||||||| Sbjct 2844 CATCAAACCGCGCTTCTTGAGCCAGAAGATTGAGGCAAAGCTTCCGCTGAAGAAAATTCC 2903 Query 36283 TTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACT-GTCATGT--ATCCA 36339 ||| || || |||||||| |||| | |||||| | || | || || ||||| Sbjct 2904 TTCGACAGCAGCAAAGGCGATAATGCGTTCTCCAAAGTTAGCCTTTGTGCTGGCGATCCA 2963 Query 36340 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAG 36399 | ||||| || ||||| || |||||||| || | |||| | || || || || Sbjct 2964 GTCCAAGGCCCAGTCAGCCTTTTTCTTTACACACGGTAGATTCTCGACGGCGTTGAAAAG 3023 Query 36400 ATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGA 36459 ||| || || ||| ||| || || ||||| | ||| ||||| || || Sbjct 3024 GAAGTCGCGCTCCTTTGAGTCTCTAATGTAGGTTTCAATGAGAAGCGAGTACATCTCGGA 3083 Query 36460 ATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTAC 36519 || | ||||| ||||| || || || || ||||| || | ||||| || | || || Sbjct 3084 GTGGACATTTTCCATGGCGATCTGGAAGCCATAGAAGCAACGGGCCTCTGTGACTTGCAC 3143 Query 36520 TTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 36579 ||| | || ||||| | | || || || || || ||||| ||||| || || Sbjct 3144 TTCCTGGCTGAACCGTTCAACGAGGTTCTCGTTAACGATGCCGTCGGAAGCTGCGAAGAA 3203 Query 36580 CGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGT----TTATTCCAATCAT 36635 |||| ||||| ||||||| || | ||||| | || ||||| || | Sbjct 3204 GGCCAGAACATGGGAGATAAAATGA----CGCTCGGTGTCCTTCAAGTTGTTCCAGTCGT 3259 Query 36636 TGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 36689 | || || || || | ||| ||||||||||||||||||||||| || || |||| Sbjct 3260 TCATGTCCTTTGACAAATCGACTTCTTCCACTGTCCAAAATGAAGCTTCAGCCT 3313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658131688881480