Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq1280 226 4e-54
seq596 208 1e-48
>seq1280
Length=9399
Score = 226 bits (250), Expect = 4e-54
Identities = 843/1303 (65%), Gaps = 40/1303 (3%)
Strand=Plus/Minus
Query 79291 GATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAAT 79350
|||||| ||| ||||| |||| || || | ||| | ||||||||| ||||| |
Sbjct 2687 GATCCTTCGTAGGTTTCGTAAGTACCGAGCTCTCTGGCGAGTTCACAACTTGCCTCAAGC 2628
Query 79351 GCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTA-TC 79409
|| ||||| || || || ||||| |||| || || || | ||||| | | ||| | ||
Sbjct 2627 GCGCCGTAGTAGATCGTCTCGAAGATCTGCTGGTTCAGCTTCTGTGCGTTT-GGCGACTC 2569
Query 79410 AAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGG 79469
|| |||||| | | || || ||||| || | ||||||| || |||||||| ||
Sbjct 2568 GAACGGATAACTCATCGTGATGAAAGCGTCGGCCAGGCCTTGAATGCCGATACCGATCGG 2509
Query 79470 TCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAAT 79529
| ||| | | | || || | ||| ||||| || || || || || | ||| || ||
Sbjct 2508 GCGATGACGCATGTTCGATCGCTTAGCCTCTGGGATCGGGTAGTAGTTGACATCGATGAT 2449
Query 79530 TTTATTGAGATTCCTGACTATTACT---TTGACCACATCCTTTAGTTTGAGAAAATC--A 79584
|| || | ||| | | | || ||| || ||||| || || | || || |
Sbjct 2448 CTTGTTCAAGTTCTT---TGTGACAGTCTTGGTGACTTCCTTGAGCTTTTGGAAGTCGTA 2392
Query 79585 AATCGTCCAT----CTATTACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGC 79640
| || | | | | ||||||||||| | |||| ||||||||||| || |||||
Sbjct 2391 AGTCTTGGCTGATGCGTTCACAAACATGTTGACAGCGATCGATGCCAGATTGCAGACGGC 2332
Query 79641 TACCTCATTAGCATCC--GCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATG 79698
|| || | | | | | ||| | || ||||| ||||| | ||| || ||||
Sbjct 2331 GACTTCGTC--CTTGCTGGAATACTCGATGATTTCCGTGCACAAGTTGGAGCAACGAATG 2274
Query 79699 GTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGA 79758
|| || | || || || || |||| ||| || || ||||| || | ||| | ||
Sbjct 2273 GTGCCGACGTTCTGCTGGTTCGACTTTCGGTTGCAAGCGTCCTTGTACAACATGTAAGGC 2214
Query 79759 GTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATA 79818
|| ||||| || | || || || || || || ||| | | || ||||||| ||
Sbjct 2213 GTGCCAGTCTCGACTTGTGACTCGATGATGGCAAACCACAAGTCTTGAGCCTTGATCTGG 2154
Query 79819 GACTTGTATCTCTTTTCTCTTTCGTAT-TGT-GTATATAATCGTTCGAACTCGTCTCCCC 79876
||| | ||| ||||||| | | ||| | || |||||||| || ||||
Sbjct 2153 CGGAGGTAACGGCCTTCGGCTTCGTATCTCTCGTACAACTTC--TCGAACTCTTCGCCCC 2096
Query 79877 AAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCT 79936
| |||| | || ||||| || ||||||||||||||||| |||| | | ||
Sbjct 2095 ACGAGTCGTAGAGGCCTGGACAGCTGTGCGGACACATCAACGACCAGACTCCGT--TGCT 2038
Query 79937 TT--ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 79994
|| || || ||| || | ||| |||||||| | ||| || | || | | |
Sbjct 2037 TTCAACGCGACGCATGAACAAATCGGGAATCCACAAAGCGTAGAACATGTCACGAGCACG 1978
Query 79995 ATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 80054
| || || || || || || || || |||||||||||| | | | || |||||
Sbjct 1977 AACTTCTTCTTTGCCAGTGTTTTTCTTGAGATCGAGGAACTCGAAGACGTCGCCGTGCCA 1918
Query 80055 CGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCT 80114
||| || | || || || | | | || ||||| |||||||| || || |||| || |
Sbjct 1917 CGGCTCGAGATAAATTGCGAAAGCACCTGGTCGCTTGTTTCCGCCTTGGTCTACATAGCG 1858
Query 80115 AGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCC 80174
||||||||| || ||||| | ||||||||||| || || || || | || ||||| ||
Sbjct 1857 AGCGGTGTTGTTGTAAACACGCAACATTGGAACAAGTCCGTTTGAGATCCCGTTGGTGCC 1798
Query 80175 GGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCC 80232
|| |||||| |||| |||| ||||| | | | ||| | ||| || || || |||
Sbjct 1797 GGCGATATACGTTCCCTTGGCGCGAATACAGTGCACGTTG--ACACCGATACCGCCAGCC 1740
Query 80233 ATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCA 80292
|| ||| || |||||| |||| | |||||| || ||||| || || |||||
Sbjct 1739 GACTTGCTGATCAAAGCGCATTGTTTCAGCGTATCGTAAATGCCGTCAATTGAGTCATCG 1680
Query 80293 ATCAT-GTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAA 80351
||| | || || ||||| || | || | ||| || | || || |
Sbjct 1679 GACATCGACAACAAG-AAACACGACGAAAGCTGCGGGCGAGGCGTAGCGGCGGCGAAGAG 1621
Query 80352 GGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGA 80411
|| || || || || || || | |||||||| || ||||| |||||||| || ||
Sbjct 1620 AGTTGGCGAGGCATGGGTGAAGTAGCGTTCAGACAAAAGGTTGTAAGTCTCAATGGCCGA 1561
Query 80412 TTCTATATC----CCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTC 80467
|| || || |||| |||| || || || || | ||| | |||||| || || |
Sbjct 1560 GTCGATGTCTTCACCATGGATG----CCCACGGCAACTCTCATGAGCATGTGTTGCGGGC 1505
Query 80468 TTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAA 80527
|| |||||||| || | |||| |||||| |||||||| || || || |
Sbjct 1504 GCTCGGCGATCTTGCCTTTGTTCTTCAGCAAGTAGCTGCGCTCCAAAGTCTTGAATCCGA 1445
Query 80528 AATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 80570
| || ||||| ||||| || ||||| || || | |||||
Sbjct 1444 AGTAATTGTAGCCGAAGTCGCGGTCGTAGATGATGGCAGAGTT 1402
>seq596
Length=46163
Score = 208 bits (230), Expect = 1e-48
Identities = 548/830 (66%), Gaps = 11/830 (1%)
Strand=Plus/Plus
Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728
||||||||||| ||||| || ||||| ||||| || ||||| || | || || |
Sbjct 2488 TTTTGGTATTCTCCCACTTTCTTCTCGAAGAAATTCGTCTTTCCCTCGAGCGAGATCGAT 2547
Query 49729 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 49788
|||||||| || ||||| | ||| || || ||| || ||| | || || |
Sbjct 2548 TCCATGAAGGAGAAGGGATTTTTGGTATTGTAGATCTTTCCAACTCCAAGCTCGGACAGA 2607
Query 49789 AATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAA-G 49847
| | ||| || || || || || ||| ||| | | | || ||||| || | | |
Sbjct 2608 AGACGATCGGCCACGAACTCGATGTATTCAGACATTAGTCCGCAGTTCATGCCGAGCATG 2667
Query 49848 TTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAAT 49907
| || ||||| || | || ||||| ||||||||||| ||| || |||| || ||
Sbjct 2668 TCGCAC-GGAAGGGCGTCGGTCAGAAACTCTTGTTCAATCTTTACAGCCTCTGAGATGAT 2726
Query 49908 AGATCTAACGGTTTCTTCACTCGGTGGATGCAAT---AAATGTTTAAACATCAAACATGC 49964
||||| ||| | | ||||| | | | | |||| | ||||||| || ||
Sbjct 2727 CTCGATAACGCGTTCCT---TTGGTGGCTTCTGTTCAAGATGTCTGAACATCAGGCAAGC 2783
Query 49965 GAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGG 50024
|| || ||||||| |||||||| | || |||||||| || || ||||| || ||
Sbjct 2784 AAAGTCACAGTGCAAGCCCTCGTCACGTGAGATGAGTTCGTTTGAGAAGGTGAGACCTGG 2843
Query 50025 CATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCC 50084
||| | || ||||| || ||||| || || || ||||| || ||||| |||||
Sbjct 2844 CATCAAACCGCGCTTCTTGAGCCAGAAGATTGAGGCAAAGCTTCCGCTGAAGAAAATTCC 2903
Query 50085 TTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCT-GTCATGT--ATCCA 50141
||| || || |||||||| | || | |||||| | | || | || || |||||
Sbjct 2904 TTCGACAGCAGCAAAGGCGATAATGCGTTCTCCAAAGTTAGCCTTTGTGCTGGCGATCCA 2963
Query 50142 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAG 50201
| ||||| || ||||| || |||||||| || | | || | ||| || || ||
Sbjct 2964 GTCCAAGGCCCAGTCAGCCTTTTTCTTTACACACGGTAGATTCTCGACGGCGTTGAAAAG 3023
Query 50202 ATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGA 50261
||| || || ||| ||| || || || || | ||| ||||| || ||
Sbjct 3024 GAAGTCGCGCTCCTTTGAGTCTCTAATGTAGGTTTCAATGAGAAGCGAGTACATCTCGGA 3083
Query 50262 ATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCAC 50321
|| | ||||| ||||| ||||| || || ||||| || | ||||| || | |||||
Sbjct 3084 GTGGACATTTTCCATGGCGATCTGGAAGCCATAGAAGCAACGGGCCTCTGTGACTTGCAC 3143
Query 50322 TTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 50381
||| | || |||||| | | || || || || || ||||| ||||| || ||
Sbjct 3144 TTCCTGGCTGAACCGTTCAACGAGGTTCTCGTTAACGATGCCGTCGGAAGCTGCGAAGAA 3203
Query 50382 CGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTGAT 50441
|||| ||||| |||||||| ||| || | | || ||||| || || ||
Sbjct 3204 GGCCAGAACATGGGAGATAAAATGACGCTCGGTGTCCTTCAAGTTGTTCCAGTCGTTCAT 3263
Query 50442 ATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 50491
|| || || | ||| ||||||||||||||||||||||| || || ||||
Sbjct 3264 GTCCTTTGACAAATCGACTTCTTCCACTGTCCAAAATGAAGCTTCAGCCT 3313
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718223935135080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |