Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq1280 226 4e-54 seq596 208 1e-48 >seq1280 Length=9399 Score = 226 bits (250), Expect = 4e-54 Identities = 843/1303 (65%), Gaps = 40/1303 (3%) Strand=Plus/Minus Query 79291 GATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAAT 79350 |||||| ||| ||||| |||| || || | ||| | ||||||||| ||||| | Sbjct 2687 GATCCTTCGTAGGTTTCGTAAGTACCGAGCTCTCTGGCGAGTTCACAACTTGCCTCAAGC 2628 Query 79351 GCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTA-TC 79409 || ||||| || || || ||||| |||| || || || | ||||| | | ||| | || Sbjct 2627 GCGCCGTAGTAGATCGTCTCGAAGATCTGCTGGTTCAGCTTCTGTGCGTTT-GGCGACTC 2569 Query 79410 AAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGG 79469 || |||||| | | || || ||||| || | ||||||| || |||||||| || Sbjct 2568 GAACGGATAACTCATCGTGATGAAAGCGTCGGCCAGGCCTTGAATGCCGATACCGATCGG 2509 Query 79470 TCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAAT 79529 | ||| | | | || || | ||| ||||| || || || || || | ||| || || Sbjct 2508 GCGATGACGCATGTTCGATCGCTTAGCCTCTGGGATCGGGTAGTAGTTGACATCGATGAT 2449 Query 79530 TTTATTGAGATTCCTGACTATTACT---TTGACCACATCCTTTAGTTTGAGAAAATC--A 79584 || || | ||| | | | || ||| || ||||| || || | || || | Sbjct 2448 CTTGTTCAAGTTCTT---TGTGACAGTCTTGGTGACTTCCTTGAGCTTTTGGAAGTCGTA 2392 Query 79585 AATCGTCCAT----CTATTACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGC 79640 | || | | | | ||||||||||| | |||| ||||||||||| || ||||| Sbjct 2391 AGTCTTGGCTGATGCGTTCACAAACATGTTGACAGCGATCGATGCCAGATTGCAGACGGC 2332 Query 79641 TACCTCATTAGCATCC--GCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATG 79698 || || | | | | | ||| | || ||||| ||||| | ||| || |||| Sbjct 2331 GACTTCGTC--CTTGCTGGAATACTCGATGATTTCCGTGCACAAGTTGGAGCAACGAATG 2274 Query 79699 GTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGA 79758 || || | || || || || |||| ||| || || ||||| || | ||| | || Sbjct 2273 GTGCCGACGTTCTGCTGGTTCGACTTTCGGTTGCAAGCGTCCTTGTACAACATGTAAGGC 2214 Query 79759 GTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATA 79818 || ||||| || | || || || || || || ||| | | || ||||||| || Sbjct 2213 GTGCCAGTCTCGACTTGTGACTCGATGATGGCAAACCACAAGTCTTGAGCCTTGATCTGG 2154 Query 79819 GACTTGTATCTCTTTTCTCTTTCGTAT-TGT-GTATATAATCGTTCGAACTCGTCTCCCC 79876 ||| | ||| ||||||| | | ||| | || |||||||| || |||| Sbjct 2153 CGGAGGTAACGGCCTTCGGCTTCGTATCTCTCGTACAACTTC--TCGAACTCTTCGCCCC 2096 Query 79877 AAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCT 79936 | |||| | || ||||| || ||||||||||||||||| |||| | | || Sbjct 2095 ACGAGTCGTAGAGGCCTGGACAGCTGTGCGGACACATCAACGACCAGACTCCGT--TGCT 2038 Query 79937 TT--ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 79994 || || || ||| || | ||| |||||||| | ||| || | || | | | Sbjct 2037 TTCAACGCGACGCATGAACAAATCGGGAATCCACAAAGCGTAGAACATGTCACGAGCACG 1978 Query 79995 ATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 80054 | || || || || || || || || |||||||||||| | | | || ||||| Sbjct 1977 AACTTCTTCTTTGCCAGTGTTTTTCTTGAGATCGAGGAACTCGAAGACGTCGCCGTGCCA 1918 Query 80055 CGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCT 80114 ||| || | || || || | | | || ||||| |||||||| || || |||| || | Sbjct 1917 CGGCTCGAGATAAATTGCGAAAGCACCTGGTCGCTTGTTTCCGCCTTGGTCTACATAGCG 1858 Query 80115 AGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCC 80174 ||||||||| || ||||| | ||||||||||| || || || || | || ||||| || Sbjct 1857 AGCGGTGTTGTTGTAAACACGCAACATTGGAACAAGTCCGTTTGAGATCCCGTTGGTGCC 1798 Query 80175 GGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCC 80232 || |||||| |||| |||| ||||| | | | ||| | ||| || || || ||| Sbjct 1797 GGCGATATACGTTCCCTTGGCGCGAATACAGTGCACGTTG--ACACCGATACCGCCAGCC 1740 Query 80233 ATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCA 80292 || ||| || |||||| |||| | |||||| || ||||| || || ||||| Sbjct 1739 GACTTGCTGATCAAAGCGCATTGTTTCAGCGTATCGTAAATGCCGTCAATTGAGTCATCG 1680 Query 80293 ATCAT-GTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAA 80351 ||| | || || ||||| || | || | ||| || | || || | Sbjct 1679 GACATCGACAACAAG-AAACACGACGAAAGCTGCGGGCGAGGCGTAGCGGCGGCGAAGAG 1621 Query 80352 GGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGA 80411 || || || || || || || | |||||||| || ||||| |||||||| || || Sbjct 1620 AGTTGGCGAGGCATGGGTGAAGTAGCGTTCAGACAAAAGGTTGTAAGTCTCAATGGCCGA 1561 Query 80412 TTCTATATC----CCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTC 80467 || || || |||| |||| || || || || | ||| | |||||| || || | Sbjct 1560 GTCGATGTCTTCACCATGGATG----CCCACGGCAACTCTCATGAGCATGTGTTGCGGGC 1505 Query 80468 TTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAA 80527 || |||||||| || | |||| |||||| |||||||| || || || | Sbjct 1504 GCTCGGCGATCTTGCCTTTGTTCTTCAGCAAGTAGCTGCGCTCCAAAGTCTTGAATCCGA 1445 Query 80528 AATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 80570 | || ||||| ||||| || ||||| || || | ||||| Sbjct 1444 AGTAATTGTAGCCGAAGTCGCGGTCGTAGATGATGGCAGAGTT 1402 >seq596 Length=46163 Score = 208 bits (230), Expect = 1e-48 Identities = 548/830 (66%), Gaps = 11/830 (1%) Strand=Plus/Plus Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728 ||||||||||| ||||| || ||||| ||||| || ||||| || | || || | Sbjct 2488 TTTTGGTATTCTCCCACTTTCTTCTCGAAGAAATTCGTCTTTCCCTCGAGCGAGATCGAT 2547 Query 49729 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 49788 |||||||| || ||||| | ||| || || ||| || ||| | || || | Sbjct 2548 TCCATGAAGGAGAAGGGATTTTTGGTATTGTAGATCTTTCCAACTCCAAGCTCGGACAGA 2607 Query 49789 AATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAA-G 49847 | | ||| || || || || || ||| ||| | | | || ||||| || | | | Sbjct 2608 AGACGATCGGCCACGAACTCGATGTATTCAGACATTAGTCCGCAGTTCATGCCGAGCATG 2667 Query 49848 TTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAAT 49907 | || ||||| || | || ||||| ||||||||||| ||| || |||| || || Sbjct 2668 TCGCAC-GGAAGGGCGTCGGTCAGAAACTCTTGTTCAATCTTTACAGCCTCTGAGATGAT 2726 Query 49908 AGATCTAACGGTTTCTTCACTCGGTGGATGCAAT---AAATGTTTAAACATCAAACATGC 49964 ||||| ||| | | ||||| | | | | |||| | ||||||| || || Sbjct 2727 CTCGATAACGCGTTCCT---TTGGTGGCTTCTGTTCAAGATGTCTGAACATCAGGCAAGC 2783 Query 49965 GAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGG 50024 || || ||||||| |||||||| | || |||||||| || || ||||| || || Sbjct 2784 AAAGTCACAGTGCAAGCCCTCGTCACGTGAGATGAGTTCGTTTGAGAAGGTGAGACCTGG 2843 Query 50025 CATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCC 50084 ||| | || ||||| || ||||| || || || ||||| || ||||| ||||| Sbjct 2844 CATCAAACCGCGCTTCTTGAGCCAGAAGATTGAGGCAAAGCTTCCGCTGAAGAAAATTCC 2903 Query 50085 TTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCT-GTCATGT--ATCCA 50141 ||| || || |||||||| | || | |||||| | | || | || || ||||| Sbjct 2904 TTCGACAGCAGCAAAGGCGATAATGCGTTCTCCAAAGTTAGCCTTTGTGCTGGCGATCCA 2963 Query 50142 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAG 50201 | ||||| || ||||| || |||||||| || | | || | ||| || || || Sbjct 2964 GTCCAAGGCCCAGTCAGCCTTTTTCTTTACACACGGTAGATTCTCGACGGCGTTGAAAAG 3023 Query 50202 ATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGA 50261 ||| || || ||| ||| || || || || | ||| ||||| || || Sbjct 3024 GAAGTCGCGCTCCTTTGAGTCTCTAATGTAGGTTTCAATGAGAAGCGAGTACATCTCGGA 3083 Query 50262 ATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCAC 50321 || | ||||| ||||| ||||| || || ||||| || | ||||| || | ||||| Sbjct 3084 GTGGACATTTTCCATGGCGATCTGGAAGCCATAGAAGCAACGGGCCTCTGTGACTTGCAC 3143 Query 50322 TTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 50381 ||| | || |||||| | | || || || || || ||||| ||||| || || Sbjct 3144 TTCCTGGCTGAACCGTTCAACGAGGTTCTCGTTAACGATGCCGTCGGAAGCTGCGAAGAA 3203 Query 50382 CGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTGAT 50441 |||| ||||| |||||||| ||| || | | || ||||| || || || Sbjct 3204 GGCCAGAACATGGGAGATAAAATGACGCTCGGTGTCCTTCAAGTTGTTCCAGTCGTTCAT 3263 Query 50442 ATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 50491 || || || | ||| ||||||||||||||||||||||| || || |||| Sbjct 3264 GTCCTTTGACAAATCGACTTCTTCCACTGTCCAAAATGAAGCTTCAGCCT 3313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718223935135080