Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq596 129 6e-25
>seq596
Length=46163
Score = 129 bits (142), Expect = 6e-25
Identities = 354/540 (66%), Gaps = 2/540 (0%)
Strand=Plus/Plus
Query 13854 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGT 13913
|||||| | || || | || ||||| ||||| || | |||||| || | || |||
Sbjct 2761 AGATGTCTGAACATCAGGCAAGCAAAGTCACAGTGCAAGCCCTCGTCACGTGAGATGAGT 2820
Query 13914 TCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCA 13973
|||||||| || || | ||||||||||| || || || || | ||| || |||| |||
Sbjct 2821 TCGTTTGAGAAGGTGAGACCTGGCATCAAACCGCGCTTCTTGAGCCAGAAGATTGAGGCA 2880
Query 13974 AATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAAC 14033
|| ||| ||||| ||||| || || |||||||| || || | |||||||||||
Sbjct 2881 AAGCTTCCGCTGAAGAAAATTCCTTCGACAGCAGCAAAGGCGATAATGCGTTCTCCAAAG 2940
Query 14034 GATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCC 14093
|| ||| || | | ||||| | ||||| |||| ||||| || | | |
Sbjct 2941 TTAGCCTTTGTGCTGGCGATCCAGTCCAAGGCCCAGTCAGCCTTTTTCTTTACACACGGT 3000
Query 14094 ATTGTTTCAATAGCATTAAATAAATATTCCTTCTCTTTAGTACTTGAAATGTATGTATCA 14153
| | || | || || || | | || ||| || | | |||||| || |||
Sbjct 3001 AGATTCTCGACGGCGTTGAAAAGGAAGTCGCGCTCCTTTGAGTCTCTAATGTAGGTTTCA 3060
Query 14154 ATAAGTAAGCTA-TACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAA 14212
|| || |||| | ||||| || ||||| | |||||||| || ||||| || ||||| ||
Sbjct 3061 ATGAG-AAGCGAGTACATCTCGGAGTGGACATTTTCCATGGCGATCTGGAAGCCATAGAA 3119
Query 14213 GCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAAC 14272
||| | || || | ||| |||||| | || | ||| | | || || |||||
Sbjct 3120 GCAACGGGCCTCTGTGACTTGCACTTCCTGGCTGAACCGTTCAACGAGGTTCTCGTTAAC 3179
Query 14273 TATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATT 14332
|| || || |||||| || || |||| | | ||||| | |||| |
Sbjct 3180 GATGCCGTCGGAAGCTGCGAAGAAGGCCAGAACATGGGAGATAAAATGACGCTCGGTGTC 3239
Query 14333 GTTGAGTTTTTTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAA 14392
|| | || ||||| ||| | ||||| || | ||| ||||| || |||||||||||
Sbjct 3240 CTTCAAGTTGTTCCAGTCGTTCATGTCCTTTGACAAATCGACTTCTTCCACTGTCCAAAA 3299
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479698034989800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |