Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq596 129 6e-25 >seq596 Length=46163 Score = 129 bits (142), Expect = 6e-25 Identities = 354/540 (66%), Gaps = 2/540 (0%) Strand=Plus/Plus Query 13854 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGT 13913 |||||| | || || | || ||||| ||||| || | |||||| || | || ||| Sbjct 2761 AGATGTCTGAACATCAGGCAAGCAAAGTCACAGTGCAAGCCCTCGTCACGTGAGATGAGT 2820 Query 13914 TCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCA 13973 |||||||| || || | ||||||||||| || || || || | ||| || |||| ||| Sbjct 2821 TCGTTTGAGAAGGTGAGACCTGGCATCAAACCGCGCTTCTTGAGCCAGAAGATTGAGGCA 2880 Query 13974 AATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAAC 14033 || ||| ||||| ||||| || || |||||||| || || | ||||||||||| Sbjct 2881 AAGCTTCCGCTGAAGAAAATTCCTTCGACAGCAGCAAAGGCGATAATGCGTTCTCCAAAG 2940 Query 14034 GATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCC 14093 || ||| || | | ||||| | ||||| |||| ||||| || | | | Sbjct 2941 TTAGCCTTTGTGCTGGCGATCCAGTCCAAGGCCCAGTCAGCCTTTTTCTTTACACACGGT 3000 Query 14094 ATTGTTTCAATAGCATTAAATAAATATTCCTTCTCTTTAGTACTTGAAATGTATGTATCA 14153 | | || | || || || | | || ||| || | | |||||| || ||| Sbjct 3001 AGATTCTCGACGGCGTTGAAAAGGAAGTCGCGCTCCTTTGAGTCTCTAATGTAGGTTTCA 3060 Query 14154 ATAAGTAAGCTA-TACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAA 14212 || || |||| | ||||| || ||||| | |||||||| || ||||| || ||||| || Sbjct 3061 ATGAG-AAGCGAGTACATCTCGGAGTGGACATTTTCCATGGCGATCTGGAAGCCATAGAA 3119 Query 14213 GCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAAC 14272 ||| | || || | ||| |||||| | || | ||| | | || || ||||| Sbjct 3120 GCAACGGGCCTCTGTGACTTGCACTTCCTGGCTGAACCGTTCAACGAGGTTCTCGTTAAC 3179 Query 14273 TATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATT 14332 || || || |||||| || || |||| | | ||||| | |||| | Sbjct 3180 GATGCCGTCGGAAGCTGCGAAGAAGGCCAGAACATGGGAGATAAAATGACGCTCGGTGTC 3239 Query 14333 GTTGAGTTTTTTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAA 14392 || | || ||||| ||| | ||||| || | ||| ||||| || ||||||||||| Sbjct 3240 CTTCAAGTTGTTCCAGTCGTTCATGTCCTTTGACAAATCGACTTCTTCCACTGTCCAAAA 3299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479698034989800