Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq596 129 6e-25
>seq596
Length=46163
Score = 129 bits (142), Expect = 6e-25
Identities = 354/540 (66%), Gaps = 2/540 (0%)
Strand=Plus/Plus
Query 13642 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGT 13701
|||||| | || || | || ||||| ||||| || | |||||| || | || |||
Sbjct 2761 AGATGTCTGAACATCAGGCAAGCAAAGTCACAGTGCAAGCCCTCGTCACGTGAGATGAGT 2820
Query 13702 TCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCG 13761
|||||||| || || | ||||||||||| || || || || | ||| || |||| ||
Sbjct 2821 TCGTTTGAGAAGGTGAGACCTGGCATCAAACCGCGCTTCTTGAGCCAGAAGATTGAGGCA 2880
Query 13762 AATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAAC 13821
|| |||| ||||| ||||| || || |||||||| || || | |||||||||||
Sbjct 2881 AAGCTTCCGCTGAAGAAAATTCCTTCGACAGCAGCAAAGGCGATAATGCGTTCTCCAAAG 2940
Query 13822 GATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCC 13881
|| ||| || | | ||||| | ||||| |||| ||||| || | | |
Sbjct 2941 TTAGCCTTTGTGCTGGCGATCCAGTCCAAGGCCCAGTCAGCCTTTTTCTTTACACACGGT 3000
Query 13882 ATTGTTTCGATTGCATTGAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCA 13941
| | |||| || ||||| | || ||| || | | |||||| || |||
Sbjct 3001 AGATTCTCGACGGCGTTGAAAAGGAAGTCGCGCTCCTTTGAGTCTCTAATGTAGGTTTCA 3060
Query 13942 ATAAGTAAGCTA-TACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAA 14000
|| || |||| | ||||| || ||||| | ||||| || || ||||| || ||||| ||
Sbjct 3061 ATGAG-AAGCGAGTACATCTCGGAGTGGACATTTTCCATGGCGATCTGGAAGCCATAGAA 3119
Query 14001 ACATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAAC 14060
|| | || |||| ||| || ||| | || | ||| | | ||| || |||||
Sbjct 3120 GCAACGGGCCTCTGTGACTTGCACTTCCTGGCTGAACCGTTCAACGAGGTTCTCGTTAAC 3179
Query 14061 AATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATT 14120
|| || || |||||| || || |||| | | ||||| | |||| |
Sbjct 3180 GATGCCGTCGGAAGCTGCGAAGAAGGCCAGAACATGGGAGATAAAATGACGCTCGGTGTC 3239
Query 14121 GTTGAGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAA 14180
|| | || ||||| ||| | ||||| || | ||| ||||| || |||||||||||
Sbjct 3240 CTTCAAGTTGTTCCAGTCGTTCATGTCCTTTGACAAATCGACTTCTTCCACTGTCCAAAA 3299
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478558906147080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |