Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq596 196 6e-45 seq1280 187 3e-42 >seq596 Length=46163 Score = 196 bits (216), Expect = 6e-45 Identities = 548/834 (66%), Gaps = 19/834 (2%) Strand=Plus/Plus Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833 ||||||||||| ||||| || ||||| ||||| |||||||| || | || || | Sbjct 2488 TTTTGGTATTCTCCCACTTTCTTCTCGAAGAAATTCGTCTTTCCCTCGAGCGAGATCGAT 2547 Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 41893 |||||||| || ||||| | ||| || || ||| || ||| | || || | Sbjct 2548 TCCATGAAGGAGAAGGGATTTTTGGTATTGTAGATCTTTCCAACTCCAAGCTCGGACAGA 2607 Query 41894 AATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAA-G 41952 | | ||| || | ||| || || ||| ||| | | | || ||||| || | | | Sbjct 2608 AGACGATCGGCCACGAACTCGATGTATTCAGACATTAGTCCGCAGTTCATGCCGAGCATG 2667 Query 41953 TTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 42012 | || ||||| || | || ||||| ||||||||||| || || |||| || || Sbjct 2668 TCGCAC-GGAAGGGCGTCGGTCAGAAACTCTTGTTCAATCTTTACAGCCTCTGAGATGAT 2726 Query 42013 AGATCTTACTGTTTCTTCACTCGGTGGATACAAT---AAATGTTTAAACATCAAACATGC 42069 | || ||| | | ||||| | | | | |||| | ||||||| || || Sbjct 2727 CTCGATAACGCGTTCCT---TTGGTGGCTTCTGTTCAAGATGTCTGAACATCAGGCAAGC 2783 Query 42070 GAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGG 42129 || || ||||||| ||||| || | || | |||||| || || ||||| || || Sbjct 2784 AAAGTCACAGTGCAAGCCCTCGTCACGTGAGATGAGTTCGTTTGAGAAGGTGAGACCTGG 2843 Query 42130 CATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCC 42189 ||| | || ||||| || ||||| || || || ||||| ||| ||||| ||||| Sbjct 2844 CATCAAACCGCGCTTCTTGAGCCAGAAGATTGAGGCAAAGCTTCCGCTGAAGAAAATTCC 2903 Query 42190 TTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACT-GTCATGT--ATCCA 42246 ||| || || |||||||| |||| | |||||| | || | || || ||||| Sbjct 2904 TTCGACAGCAGCAAAGGCGATAATGCGTTCTCCAAAGTTAGCCTTTGTGCTGGCGATCCA 2963 Query 42247 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAG 42306 | ||||| || ||||| || |||||||| || | | || | ||| || || || Sbjct 2964 GTCCAAGGCCCAGTCAGCCTTTTTCTTTACACACGGTAGATTCTCGACGGCGTTGAAAAG 3023 Query 42307 ATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGA 42366 ||| || || ||| ||| || || || || | ||| ||||| || || Sbjct 3024 GAAGTCGCGCTCCTTTGAGTCTCTAATGTAGGTTTCAATGAGAAGCGAGTACATCTCGGA 3083 Query 42367 ATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTAC 42426 || | ||||| ||||| ||||| || || ||||| || | |||||| || || || || Sbjct 3084 GTGGACATTTTCCATGGCGATCTGGAAGCCATAGAAGCAACGGGCCTCTGTGACTTGCAC 3143 Query 42427 TTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAA 42486 ||| | || |||||| | | || ||||| || || ||||| ||||| || || Sbjct 3144 TTCCTGGCTGAACCGTTCAACGAGGTTCTCGTTAACGATGCCGTCGGAAGCTGCGAAGAA 3203 Query 42487 CGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTT----AATTTATTCCAATCAT 42542 |||| ||||| ||||||| || |||||| || || ||||| || | Sbjct 3204 GGCCAGAACATGGGAGATAAAATGA----CGCTCGGTGTCCTTCAAGTTGTTCCAGTCGT 3259 Query 42543 TGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCT 42596 | || || || || | ||| |||||||| || ||||||||||| ||||| |||| Sbjct 3260 TCATGTCCTTTGACAAATCGACTTCTTCCACTGTCCAAAATGAAGCTTCAGCCT 3313 >seq1280 Length=9399 Score = 187 bits (206), Expect = 3e-42 Identities = 806/1256 (64%), Gaps = 34/1256 (3%) Strand=Plus/Minus Query 71409 GGCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGTTTCGAAAATCTTCTTATT 71468 ||| ||||||||||| ||||| | || || || || || || ||||| |||| || || Sbjct 2652 GGCGAGTTCACAACTTGCCTCAAGCGCGCCGTAGTAGATCGTCTCGAAGATCTGCTGGTT 2593 Query 71469 GAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAA 71528 || | ||||| | || || || |||||| | | || || ||||| || | Sbjct 2592 CAGCTTCTGTGCGTTTGGCGACTCGAACGGATAACTCATCGTGATGAAAGCGTCGGCCAG 2533 Query 71529 TCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGAAATTTCAGCTTCTGGAAT 71588 ||||||| ||| |||||||| || | || | | | || || | ||| ||||| || Sbjct 2532 GCCTTGAATGCCGATACCGATCGGGCGATGACGCATGTTCGATCGCTTAGCCTCTGGGAT 2473 Query 71589 AGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACTATTACT-TTGACCACAT 71647 || || || || | ||| || || || || | | |||| | | | ||| || | Sbjct 2472 CGGGTAGTAGTTGACATCGATGATCTTGTTCA-AGTTCTTTGTGACAGTCTTGGTGACTT 2414 Query 71648 CCTTTAGTTTGAGAAAATC--AAATCT---CCCATCTATT-ACAAACACGTTCAAGGCAA 71701 |||| || || | || || || ||| | || || ||||||| ||| | || | Sbjct 2413 CCTTGAGCTTTTGGAAGTCGTAAGTCTTGGCTGATGCGTTCACAAACATGTTGACAGCGA 2354 Query 71702 CAGATGCCAGATTACAAACGGCTACCTCAT--TAGCATCGGCATATTGTATAATTTCAGT 71759 ||||||||||| || ||||| || || | | || || ||| | || ||||| || Sbjct 2353 TCGATGCCAGATTGCAGACGGCGACTTCGTCCTTGCT--GGAATACTCGATGATTTCCGT 2296 Query 71760 GCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGC 71819 ||| | || || ||||| || | || || || || |||| ||| || || Sbjct 2295 GCACAAGTTGGAGCAACGAATGGTGCCGACGTTCTGCTGGTTCGACTTTCGGTTGCAAGC 2236 Query 71820 ATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCA 71879 ||||| || | || | || || ||||| || | || || || || || || ||| Sbjct 2235 GTCCTTGTACAACATGTAAGGCGTGCCAGTCTCGACTTGTGACTCGATGATGGCAAACCA 2176 Query 71880 GACGACTCGAGCCTTTATTATATTCTTGTATCTCTTTTCTCTTTCGTAT-TGT-GTATAT 71937 | | || ||||||| || ||| | ||| ||||||| | | ||| | Sbjct 2175 CAAGTCTTGAGCCTTGATCTGGCGGAGGTAACGGCCTTCGGCTTCGTATCTCTCGTACAA 2116 Query 71938 AATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATC 71997 || |||||||| || ||||| | | || | || ||||| | |||||||||| Sbjct 2115 CTTC--TCGAACTCTTCGCCCCACGAGTCGTAGAGGCCTGGACAGCTGTGCGGACACATC 2058 Query 71998 AATGACCACTCTCCATCATCATTT--ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAG 72055 || ||||| |||| | | ||| || || ||| || | ||| |||||||| | || Sbjct 2057 AACGACCAGACTCCGT--TGCTTTCAACGCGACGCATGAACAAATCGGGAATCCACAAAG 2000 Query 72056 CTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGA 72115 | || | || | | | | || || || || || || || || |||||||||| Sbjct 1999 CGTAGAACATGTCACGAGCACGAACTTCTTCTTTGCCAGTGTTTTTCTTGAGATCGAGGA 1940 Query 72116 ACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGT 72175 || | | | || |||||||| || | || || || | | | || || || |||| Sbjct 1939 ACTCGAAGACGTCGCCGTGCCACGGCTCGAGATAAATTGCGAAAGCACCTGGTCGCTTGT 1880 Query 72176 TTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATAC 72235 |||| || || |||| || | ||||||||| || ||||| | ||||||||||| || | Sbjct 1879 TTCCGCCTTGGTCTACATAGCGAGCGGTGTTGTTGTAAACACGCAACATTGGAACAAGTC 1820 Query 72236 CATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTGCTAAT 72293 | || || || ||||| |||| |||||| |||| |||| ||||| | ||| | Sbjct 1819 CGTTTGAGATCCCGTTGGTGCCGGCGATATACGTTCCCTTGGCGCGAATACAGTGCACGT 1760 Query 72294 TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATA 72353 || | ||| || || || ||| || ||| || |||||| |||| | |||||| || Sbjct 1759 TG--ACACCGATACCGCCAGCCGACTTGCTGATCAAAGCGCATTGTTTCAGCGTATCGTA 1702 Query 72354 GATGCCCTCTATACTATCATCCATCAT-GTTAAGTAGAAAACAGCTAGACATTTGGTGAC 72412 ||||| || || ||||| ||| | || || ||||| || | || | | Sbjct 1701 AATGCCGTCAATTGAGTCATCGGACATCGACAACAAG-AAACACGACGAAAGCTGCGGGC 1643 Query 72413 GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTA 72472 || || | || || | || || || || || || || | |||||||| | Sbjct 1642 GAGGCGTAGCGGCGGCGAAGAGAGTTGGCGAGGCATGGGTGAAGTAGCGTTCAGACAAAA 1583 Query 72473 GATTGTACGTCTCAATAGCTGATTCTATATC----CCATTGATGTATTCCTACCGCGACA 72528 | ||||| |||||||| || || || || || |||| |||| || || || || Sbjct 1582 GGTTGTAAGTCTCAATGGCCGAGTCGATGTCTTCACCATGGATG----CCCACGGCAACT 1527 Query 72529 CGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGAT 72588 | ||| | ||| || || || | || |||||||| || | |||| ||||||| Sbjct 1526 CTCATGAGCATGTGTTGCGGGCGCTCGGCGATCTTGCCTTTGTTCTTCAGCAAGTAGCTG 1467 Query 72589 TTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 72644 |||||||| || || || || || ||||| ||||| || ||||| || || Sbjct 1466 CGCTCCAAAGTCTTGAATCCGAAGTAATTGTAGCCGAAGTCGCGGTCGTAGATGAT 1411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671097278967720