Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq596 196 6e-45
seq1280 187 3e-42
>seq596
Length=46163
Score = 196 bits (216), Expect = 6e-45
Identities = 548/834 (66%), Gaps = 19/834 (2%)
Strand=Plus/Plus
Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833
||||||||||| ||||| || ||||| ||||| |||||||| || | || || |
Sbjct 2488 TTTTGGTATTCTCCCACTTTCTTCTCGAAGAAATTCGTCTTTCCCTCGAGCGAGATCGAT 2547
Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 41893
|||||||| || ||||| | ||| || || ||| || ||| | || || |
Sbjct 2548 TCCATGAAGGAGAAGGGATTTTTGGTATTGTAGATCTTTCCAACTCCAAGCTCGGACAGA 2607
Query 41894 AATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAA-G 41952
| | ||| || | ||| || || ||| ||| | | | || ||||| || | | |
Sbjct 2608 AGACGATCGGCCACGAACTCGATGTATTCAGACATTAGTCCGCAGTTCATGCCGAGCATG 2667
Query 41953 TTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 42012
| || ||||| || | || ||||| ||||||||||| || || |||| || ||
Sbjct 2668 TCGCAC-GGAAGGGCGTCGGTCAGAAACTCTTGTTCAATCTTTACAGCCTCTGAGATGAT 2726
Query 42013 AGATCTTACTGTTTCTTCACTCGGTGGATACAAT---AAATGTTTAAACATCAAACATGC 42069
| || ||| | | ||||| | | | | |||| | ||||||| || ||
Sbjct 2727 CTCGATAACGCGTTCCT---TTGGTGGCTTCTGTTCAAGATGTCTGAACATCAGGCAAGC 2783
Query 42070 GAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGG 42129
|| || ||||||| ||||| || | || | |||||| || || ||||| || ||
Sbjct 2784 AAAGTCACAGTGCAAGCCCTCGTCACGTGAGATGAGTTCGTTTGAGAAGGTGAGACCTGG 2843
Query 42130 CATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCC 42189
||| | || ||||| || ||||| || || || ||||| ||| ||||| |||||
Sbjct 2844 CATCAAACCGCGCTTCTTGAGCCAGAAGATTGAGGCAAAGCTTCCGCTGAAGAAAATTCC 2903
Query 42190 TTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACT-GTCATGT--ATCCA 42246
||| || || |||||||| |||| | |||||| | || | || || |||||
Sbjct 2904 TTCGACAGCAGCAAAGGCGATAATGCGTTCTCCAAAGTTAGCCTTTGTGCTGGCGATCCA 2963
Query 42247 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAG 42306
| ||||| || ||||| || |||||||| || | | || | ||| || || ||
Sbjct 2964 GTCCAAGGCCCAGTCAGCCTTTTTCTTTACACACGGTAGATTCTCGACGGCGTTGAAAAG 3023
Query 42307 ATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGA 42366
||| || || ||| ||| || || || || | ||| ||||| || ||
Sbjct 3024 GAAGTCGCGCTCCTTTGAGTCTCTAATGTAGGTTTCAATGAGAAGCGAGTACATCTCGGA 3083
Query 42367 ATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTAC 42426
|| | ||||| ||||| ||||| || || ||||| || | |||||| || || || ||
Sbjct 3084 GTGGACATTTTCCATGGCGATCTGGAAGCCATAGAAGCAACGGGCCTCTGTGACTTGCAC 3143
Query 42427 TTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAA 42486
||| | || |||||| | | || ||||| || || ||||| ||||| || ||
Sbjct 3144 TTCCTGGCTGAACCGTTCAACGAGGTTCTCGTTAACGATGCCGTCGGAAGCTGCGAAGAA 3203
Query 42487 CGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTT----AATTTATTCCAATCAT 42542
|||| ||||| ||||||| || |||||| || || ||||| || |
Sbjct 3204 GGCCAGAACATGGGAGATAAAATGA----CGCTCGGTGTCCTTCAAGTTGTTCCAGTCGT 3259
Query 42543 TGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCT 42596
| || || || || | ||| |||||||| || ||||||||||| ||||| ||||
Sbjct 3260 TCATGTCCTTTGACAAATCGACTTCTTCCACTGTCCAAAATGAAGCTTCAGCCT 3313
>seq1280
Length=9399
Score = 187 bits (206), Expect = 3e-42
Identities = 806/1256 (64%), Gaps = 34/1256 (3%)
Strand=Plus/Minus
Query 71409 GGCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGTTTCGAAAATCTTCTTATT 71468
||| ||||||||||| ||||| | || || || || || || ||||| |||| || ||
Sbjct 2652 GGCGAGTTCACAACTTGCCTCAAGCGCGCCGTAGTAGATCGTCTCGAAGATCTGCTGGTT 2593
Query 71469 GAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAA 71528
|| | ||||| | || || || |||||| | | || || ||||| || |
Sbjct 2592 CAGCTTCTGTGCGTTTGGCGACTCGAACGGATAACTCATCGTGATGAAAGCGTCGGCCAG 2533
Query 71529 TCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGAAATTTCAGCTTCTGGAAT 71588
||||||| ||| |||||||| || | || | | | || || | ||| ||||| ||
Sbjct 2532 GCCTTGAATGCCGATACCGATCGGGCGATGACGCATGTTCGATCGCTTAGCCTCTGGGAT 2473
Query 71589 AGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACTATTACT-TTGACCACAT 71647
|| || || || | ||| || || || || | | |||| | | | ||| || |
Sbjct 2472 CGGGTAGTAGTTGACATCGATGATCTTGTTCA-AGTTCTTTGTGACAGTCTTGGTGACTT 2414
Query 71648 CCTTTAGTTTGAGAAAATC--AAATCT---CCCATCTATT-ACAAACACGTTCAAGGCAA 71701
|||| || || | || || || ||| | || || ||||||| ||| | || |
Sbjct 2413 CCTTGAGCTTTTGGAAGTCGTAAGTCTTGGCTGATGCGTTCACAAACATGTTGACAGCGA 2354
Query 71702 CAGATGCCAGATTACAAACGGCTACCTCAT--TAGCATCGGCATATTGTATAATTTCAGT 71759
||||||||||| || ||||| || || | | || || ||| | || ||||| ||
Sbjct 2353 TCGATGCCAGATTGCAGACGGCGACTTCGTCCTTGCT--GGAATACTCGATGATTTCCGT 2296
Query 71760 GCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGC 71819
||| | || || ||||| || | || || || || |||| ||| || ||
Sbjct 2295 GCACAAGTTGGAGCAACGAATGGTGCCGACGTTCTGCTGGTTCGACTTTCGGTTGCAAGC 2236
Query 71820 ATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCA 71879
||||| || | || | || || ||||| || | || || || || || || |||
Sbjct 2235 GTCCTTGTACAACATGTAAGGCGTGCCAGTCTCGACTTGTGACTCGATGATGGCAAACCA 2176
Query 71880 GACGACTCGAGCCTTTATTATATTCTTGTATCTCTTTTCTCTTTCGTAT-TGT-GTATAT 71937
| | || ||||||| || ||| | ||| ||||||| | | ||| |
Sbjct 2175 CAAGTCTTGAGCCTTGATCTGGCGGAGGTAACGGCCTTCGGCTTCGTATCTCTCGTACAA 2116
Query 71938 AATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATC 71997
|| |||||||| || ||||| | | || | || ||||| | ||||||||||
Sbjct 2115 CTTC--TCGAACTCTTCGCCCCACGAGTCGTAGAGGCCTGGACAGCTGTGCGGACACATC 2058
Query 71998 AATGACCACTCTCCATCATCATTT--ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAG 72055
|| ||||| |||| | | ||| || || ||| || | ||| |||||||| | ||
Sbjct 2057 AACGACCAGACTCCGT--TGCTTTCAACGCGACGCATGAACAAATCGGGAATCCACAAAG 2000
Query 72056 CTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGA 72115
| || | || | | | | || || || || || || || || ||||||||||
Sbjct 1999 CGTAGAACATGTCACGAGCACGAACTTCTTCTTTGCCAGTGTTTTTCTTGAGATCGAGGA 1940
Query 72116 ACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGT 72175
|| | | | || |||||||| || | || || || | | | || || || ||||
Sbjct 1939 ACTCGAAGACGTCGCCGTGCCACGGCTCGAGATAAATTGCGAAAGCACCTGGTCGCTTGT 1880
Query 72176 TTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATAC 72235
|||| || || |||| || | ||||||||| || ||||| | ||||||||||| || |
Sbjct 1879 TTCCGCCTTGGTCTACATAGCGAGCGGTGTTGTTGTAAACACGCAACATTGGAACAAGTC 1820
Query 72236 CATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTGCTAAT 72293
| || || || ||||| |||| |||||| |||| |||| ||||| | ||| |
Sbjct 1819 CGTTTGAGATCCCGTTGGTGCCGGCGATATACGTTCCCTTGGCGCGAATACAGTGCACGT 1760
Query 72294 TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATA 72353
|| | ||| || || || ||| || ||| || |||||| |||| | |||||| ||
Sbjct 1759 TG--ACACCGATACCGCCAGCCGACTTGCTGATCAAAGCGCATTGTTTCAGCGTATCGTA 1702
Query 72354 GATGCCCTCTATACTATCATCCATCAT-GTTAAGTAGAAAACAGCTAGACATTTGGTGAC 72412
||||| || || ||||| ||| | || || ||||| || | || | |
Sbjct 1701 AATGCCGTCAATTGAGTCATCGGACATCGACAACAAG-AAACACGACGAAAGCTGCGGGC 1643
Query 72413 GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTA 72472
|| || | || || | || || || || || || || | |||||||| |
Sbjct 1642 GAGGCGTAGCGGCGGCGAAGAGAGTTGGCGAGGCATGGGTGAAGTAGCGTTCAGACAAAA 1583
Query 72473 GATTGTACGTCTCAATAGCTGATTCTATATC----CCATTGATGTATTCCTACCGCGACA 72528
| ||||| |||||||| || || || || || |||| |||| || || || ||
Sbjct 1582 GGTTGTAAGTCTCAATGGCCGAGTCGATGTCTTCACCATGGATG----CCCACGGCAACT 1527
Query 72529 CGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGAT 72588
| ||| | ||| || || || | || |||||||| || | |||| |||||||
Sbjct 1526 CTCATGAGCATGTGTTGCGGGCGCTCGGCGATCTTGCCTTTGTTCTTCAGCAAGTAGCTG 1467
Query 72589 TTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 72644
|||||||| || || || || || ||||| ||||| || ||||| || ||
Sbjct 1466 CGCTCCAAAGTCTTGAATCCGAAGTAATTGTAGCCGAAGTCGCGGTCGTAGATGAT 1411
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671097278967720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |